Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1966 CTTGATTATATTTATTTATTTGGCCAGAAGAACAAGTTTGCAATTACTAATGACAAGGGTAGGCTCTCAAAGGAGGAGATTGAGAAGAAGGTACAAGAAGCTGAGAAGTACAAATCGGAGGACGAGGAACACAAGAAGAAGGTGGAGGCCAAGAATGCTCTTGAGAACTATGCCTATAACATGAGGAACACAATCAAGGATGACAACATTGCTTCTAAGTTGTCTGCTGATGATAAGAAGAAGATTGAAGATGCTATCGAGCATGCAATTCAATGGCTGGATGGAAACCAACTTGCAGAGGCTGATGAATTTGAAGACAATAATGAATTGAAGCATCAAGTATGCTATTGGGTGATTATAGTAAATCACAAATTTTATGATGCCAAGCAAAGTATTCCACACTTGAGGCCTACAGAGTACAAGAGATCAAGGTTGCCTAGAAACCGTAGGACTGTTAACTGTGCATATGGTGGTGTTTTGTCTGGAGGTGCTGTTAGGGAAAGGGATGGGCAGTAA 516 0.405 LDYIYLFGQKNKFAITNDKGRLSKEEIEKKVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNTIKDDNIASKLSADDKKKIEDAIEHAIQWLDGNQLAEADEFEDNNELKHQVCYWVIIVNHKFYDAKQSIPHLRPTEYKRSRLPRNRRTVNCAYGGVLSGGAVRERDGQ* 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1966 171 Pfam Hsp70 protein 8 108 IPR013126 GO:0005524|GO:0140662
Tpr2g1966 171 Gene3D - 125 169 - -
Tpr2g1966 171 Coils Coil 24 47 - -
Tpr2g1966 171 PANTHER HEAT SHOCK COGNATE 70 KDA PROTEIN 2-LIKE 8 131 - -
Tpr2g1966 171 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 6 50 IPR029047 -
Tpr2g1966 171 PANTHER HEAT SHOCK PROTEIN 70KDA 8 131 IPR013126 GO:0005524|GO:0140662
Tpr2g1966 171 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 8 55 IPR029047 -
Tpr2g1966 171 Gene3D - 51 124 IPR029048 -
Tpr2g1966 171 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 49 115 IPR029048 -
Tpr2g1966 171 Pfam Ribosomal protein L34e 130 168 IPR008195 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1966 Tpr-Chr2 23580813 23581793 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g1966 8 119 Calmodulin-binding Proteins AT3G12580 79.464 5.07e-53 176