Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1957 ATGGCTACAATGAAAGAGTTAAAACCCCAGTCCTCCTCTTCCTTTACCCATGAATGGGTTTACGATGTTTTCCTCAGTTTTCGAGGAGAGGACACTCGAAAGGGTTTTACCGGAAACCTTTATAATGCACTTTGTGAAAAAGGAATCAACACTTTCATAGATGATAAAGAGCTAAGAAAAGGAGAAGAAATCAAACTAGCTCTCATGACAGCAATCCAACAATCAAGGGCGGCAATTGTGATTTTTTCAGAAAACTACGCATCATCCACTTATTGCTTGGAAGAACTTACAAAGATCATGGAGTGCATAAAACGCAATGGCAGGTTGGTTTGGCCAGTTTTTTATCAAGTTGACCCTTCTGATGTGCGCCATCAGAAAGGGAGCTACGCAGAAGCACTGGCCAATCATGAAAGAGAAAAAACCATTGACAAGGAAAAGGTAAAACAATGGAGGTCAGCTTTGGAAGAAGCAGCTAACCTATCGGGTTGGCATTTCAAACACGGGTACGAGTATGAGTTGATTGAAGAGATCGTTAAAGAAGTCTCTAAAAAGATTAATCGTAGGCCTTTACATGTTGCTAAATACCCTGTTGGGTTAGTGTCACGAGTGCAAAAACTGAACTCGCTTCTAGAAATTGAATCAGATGAGGTGGTTCAAATGGTAGGGATTTTTGGAATGGGTGGGTTAGGCAAAACAACACTTGCATGTGCCGTATACAATTGCATTGCTGATCGATTTGATAGTCTCTGTTTTCTTGCTAATGTTAGAGACAATTCAAAGAAGTATGGTTTGGTACAAGTACAGGAGATGCTTCTTTCGGAATTAGCTGGGGAGAAAGATCTTAATTTGTGCAGTTTAAATAAGGGAATTTCTATTATAAAAAGTAGACTTTCTGGGAAAAAAATTCTATTGATCCTGGATGATGTTGACAGGTTGGAGCAACTAGAAGCACTTGCTGGTGGACTTGACTGGTTTGGTTCAGGCAGCAGAGTTATTATCACAACAAGGAATAAGCATTTGCTGCATGTTCAACGCATTGAAAGAGTTTATGAATTAGAAGGATTGAAGGATGGAGAAGCCCTTGAATTGTTTGCTTGGAATGCTTTCAAAACAAAAGAAATTGATCCTAGTTATGTGGACATTTCAAAGAGAGCAGTGCGTTATTCTAATGGACTTCCATTGTCTGTTGAAATAATAGGCTCTGACTTGTACGGTAAAACAAAATCGGAGTGGAAATCTGCTTTGGATACTTATGAGAGAATTCCTCATGATAATATTCAGGAAATCCTACGAGTAAGTTATGATGGCTTAAAAGAATTTGAGAAGGAAATCTTTTTAGACATCGCTTGCTTCTTCAAAGGATACAAACTAAGTGATGTTGCGAACATACTAACCAGGGGACGTGGCTTCAACCCAGACTATGCTATCCAGGTGCTGATTGATAAAAGCCTGATAAAAATTGATCATTGTCACGTGAGGATACATGACATGATTGAAGATATGGGAAGAGAAATTGTGCGGCTGGAATCAGCCTCAAAGCCAGGTGAACGCAGTAGATTATGGTTCTCCACAGATATTCTACATGTTTTCAAAGAGAACAAGGGGTCTGATAAAACTGAGGTCATCATGCTACGCCTACTCAAAGATAAAGAAGTCCAATGGGATGGAAATGCATTGAAGAAAATGGAAAACCTCAAAATACTGGTAATAGAAAAAGCTCACTTTTCCAGAGGACCTACTCATCTCCCAAAAAGTTTAAAAGTGCTAAAATGGTGTGATTATCCTGAATCGTCATTGCCAGCTCATTATGATCCAAAGAAACTTGTCATACTCGACCTGTCTATGGGCCTTTTTACCTTCGGCAAACAAAAAATCATGGAATTTAAATCTTTGACAGAAATGAAGTTAAGCAAGTGTCAATCCTTAAAGAAAGTACCTGACATGTCTGGAGCTCCAAATTTGAAGAAACTGCATCTTGATTCCTGCAAGAGATTAGTTAAAGTTCATGATTCCGTTGGGTTCCTTGGAAAACTTGAAGATTTGAATCTTAATGGTTGCACCGGTCTCAAGATTCTTCCCCGTGGCATCAACTTACCTTCACTTAAAACCATGTCCCTTAGGAATTGTAAAGCTCTTAAGAATTTTCCAGAAATTCTAGGGAAGATGGAAAACATAACATACCTTGTTTTGAGTGATAGTGGGATATGTGATTTGCCCTTCTCCATTGGACTTCTTGTGGGGCTTGCAAACCTGGCTATAGACAGATGCAACAACCTACTTGAACTACCGAGTAGTATTTTTATGTTGCCAGAACTTAAGGCCTTGGAGGCTTACAGTTGCAAGGGGCTTGCACGAATCAAGAAGGGAAAAGGTCAATTGCGGGAAACATCTTCAGATGTGAAAAGTGTTGTTGAATTCAGCTTTTGCCATCTATCAGATGAGAAAAGTGTTGTTGACTTCAGCTTTTGCCATCTATCAGATGAATTTCTCGTTACACTTCTTCCTTGCTTTCACTGTGTCACAAATTTATCCCTTGATTACAGCAGTATCACGATCCTTCCATCATGCATCAATGCATGCCACTCTTTGGAGGAACTTACTCTGAATAATTGTACGGCGCTACGAGAAATCAGAGACCTGCCACCAAACATAAAACATCTTAGTGCAATAAATTGTACATCATTGACTTCCCAATCCAAGAAAATGTTATTGAACAAGATGCTGCCCAATTCTGGGACCAAATATATCTGTTTTCCAGGATCAACTATCCCCAGCTGGTTCCATGAAAATAGACAGGCACCGTCTATGTCCTTCAAGTTCCGAAAAAAATTGCCACTGATGGCTCTTAGTGTTGCAGTAGTTGCGGGTGGTTGTTATTGTTCAAAATGTTGTCTGAAGTGTGACTTTGACCTGATCATTAATGGCAGTAAACGGCTCACGAACTTTCTCCATGTTAGTTGGTCTAAAACTAATGCAATTGATACAAATTTAAATCATATAATTCTGCTGGATCTGCAGCTCAAAGCTAGTCTGGATATGATTGGAAAACTACGTATTATGAATGGATGGAATCATGCTGAGATTTCATTAGTAAAACACAGTGGACAAGATATGAAATGGATGAGACTTCATGTACAGGAACAGAAAACAAGCATGGCAGATATTCAAATTATCAATCCTAAGGTTACAATAGAAGGAAAAGAAAAGAAAAATGTCACGTGTGGTGATAAAAGTTAG 3237 0.3905 MATMKELKPQSSSSFTHEWVYDVFLSFRGEDTRKGFTGNLYNALCEKGINTFIDDKELRKGEEIKLALMTAIQQSRAAIVIFSENYASSTYCLEELTKIMECIKRNGRLVWPVFYQVDPSDVRHQKGSYAEALANHEREKTIDKEKVKQWRSALEEAANLSGWHFKHGYEYELIEEIVKEVSKKINRRPLHVAKYPVGLVSRVQKLNSLLEIESDEVVQMVGIFGMGGLGKTTLACAVYNCIADRFDSLCFLANVRDNSKKYGLVQVQEMLLSELAGEKDLNLCSLNKGISIIKSRLSGKKILLILDDVDRLEQLEALAGGLDWFGSGSRVIITTRNKHLLHVQRIERVYELEGLKDGEALELFAWNAFKTKEIDPSYVDISKRAVRYSNGLPLSVEIIGSDLYGKTKSEWKSALDTYERIPHDNIQEILRVSYDGLKEFEKEIFLDIACFFKGYKLSDVANILTRGRGFNPDYAIQVLIDKSLIKIDHCHVRIHDMIEDMGREIVRLESASKPGERSRLWFSTDILHVFKENKGSDKTEVIMLRLLKDKEVQWDGNALKKMENLKILVIEKAHFSRGPTHLPKSLKVLKWCDYPESSLPAHYDPKKLVILDLSMGLFTFGKQKIMEFKSLTEMKLSKCQSLKKVPDMSGAPNLKKLHLDSCKRLVKVHDSVGFLGKLEDLNLNGCTGLKILPRGINLPSLKTMSLRNCKALKNFPEILGKMENITYLVLSDSGICDLPFSIGLLVGLANLAIDRCNNLLELPSSIFMLPELKALEAYSCKGLARIKKGKGQLRETSSDVKSVVEFSFCHLSDEKSVVDFSFCHLSDEFLVTLLPCFHCVTNLSLDYSSITILPSCINACHSLEELTLNNCTALREIRDLPPNIKHLSAINCTSLTSQSKKMLLNKMLPNSGTKYICFPGSTIPSWFHENRQAPSMSFKFRKKLPLMALSVAVVAGGCYCSKCCLKCDFDLIINGSKRLTNFLHVSWSKTNAIDTNLNHIILLDLQLKASLDMIGKLRIMNGWNHAEISLVKHSGQDMKWMRLHVQEQKTSMADIQIINPKVTIEGKEKKNVTCGDKS* 1079
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1957 1078 SUPERFAMILY "Winged helix" DNA-binding domain 425 530 IPR036390 -
Tpr2g1957 1078 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 31 1030 IPR044974 GO:0006952
Tpr2g1957 1078 Gene3D Ribonuclease Inhibitor 713 911 IPR032675 -
Tpr2g1957 1078 PRINTS Disease resistance protein signature 220 235 - -
Tpr2g1957 1078 PRINTS Disease resistance protein signature 296 310 - -
Tpr2g1957 1078 PRINTS Disease resistance protein signature 389 403 - -
Tpr2g1957 1078 PRINTS Disease resistance protein signature 696 712 - -
Tpr2g1957 1078 SUPERFAMILY Toll/Interleukin receptor TIR domain 11 163 IPR035897 -
Tpr2g1957 1078 Gene3D Ribonuclease Inhibitor 537 712 IPR032675 -
Tpr2g1957 1078 ProSiteProfiles TIR domain profile. 19 185 IPR000157 GO:0007165
Tpr2g1957 1078 SUPERFAMILY L domain-like 539 901 - -
Tpr2g1957 1078 PANTHER ARCHAEAL ATPASE 31 1030 - -
Tpr2g1957 1078 SMART till_3 20 160 IPR000157 GO:0007165
Tpr2g1957 1078 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 185 448 IPR027417 -
Tpr2g1957 1078 CDD AAA 223 337 - -
Tpr2g1957 1078 Pfam NB-ARC domain 208 434 IPR002182 GO:0043531
Tpr2g1957 1078 Pfam TIR domain 21 186 IPR000157 GO:0007165
Tpr2g1957 1078 Gene3D - 184 348 IPR027417 -
Tpr2g1957 1078 Gene3D - 354 438 IPR042197 -
Tpr2g1957 1078 Gene3D - 14 183 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1957 Tpr-Chr2 23506148 23510760 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g1957 5 786 WRKY Transcription Factor Family AT4G12020 31.762 6.41e-94 328
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1957 - - mtr:MTR_5g040490 1581.23