Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1954 ATGGCTACCATGAGAAAATTAAAATCCTCATCCTCTTCTTCCATCACTTATGGATGGGCTTATGATGTTTTTCTCAGTTTTCGAGGGGAGGATACTCGCATGGGTTTTACCGGAAACCTTTATAATGCTCTTGTTGGAAAAGGAATCAACACTTTCATAGATGATGAAGAACTTAGAAAAGGAGAAGAAATCACACCAGCTCTCATGATGGCAATCCAACAATCAAGGATTGCAGTTGTGATTTTTTCAGAAAACTATGCATCATCCACTTTCTGCTTGGAAGAACTTAGAAAGATCATGGAGTGCATAAAACACAAAGGCAGGTTGGTTTGGCCAGTTTTTTATAAAGTTGACCCTTCTGATGTGCGCCATCTGAAAGGGAGTTATGCAGAAGCACTTGCCAAATGTAAAAGAAAAACCTTTGACACAGAGAAGGTCAAACAGTGGAAGTTAGCTTTGCAAGAAGCAGCAAATTTGGTAGGTTCGCATTTCAAACACGGGTACGAGTATAAGTTCATTGGCAAGATCATTCAAGAGGTCTCTAAAAAGATTAATCGTAGACCTTTACATGTGGCTAAATACCCTGTTGGGTTAGAGTCTCGAGTACAAAAATTGAACTCACTTCTAGAAGTTGAATCAGATGAGGGGGCTCAAATGGTAGGGATTTACGGAATGGGTGGATTAGGTAAAACAACACTTGCATGTGCTATATACAATTGCATTGCTGACCAATTTGATAGTCTCTGTTTTCTTGGTGATATTAGAGAAAATTCTATGAAGCGTGGTTTGGTACAACTACAGGAGATGCTTCTTTTTGAATTAGCTGGAGAGAAAGATCTTAAGTTGTGCAGTTTAAATAAAGGAATTCCTATAATCAAAAGTAGGCTTCGTGGGAAAAAAATTCTATTGATTTTGGATGATGTTAACAGTCTGGAGCAACTAAAAGCACTTGCTGGTGGACTTGATTGGTTTGGTTCTGGCAGCAGAGTTATTATAACAACAAGGGATAAGCATTTGTTGCATGTTTATGGTGTTAAAAGAGTCTATGAAGTAGAAGGATTCAATTGTGAAGAAGCCCTTGAATTGTTTGTTTGGAATGCTTTTAAATCAAAAGAAGTTGATCCTAGTCATTTGGACATTTCAAAGAAAGTAGTACTTTATTTTAATGGTCTTCCATTGGCTGTTGAAATAATAGGTTCTGACTTATATGGTAGAACAATATTAGAATGGAAATCTGCTATAGATACTTATGAGAGAATTCCTCATGATAATATTCAGGAAATCCTACGAGTAAGTTATGATGGCTTAAAAGAATTTGAGAAGGAAATCTTTTTAGACATCGCTTGCTTCTTCAAAGGATACAAACTAACTGATGTCATGAACATACTTTGTAGTGGTCGTGGCTTCGCCCCAGACTATGCTATCCAGGTGTTGATTGATAAGAGTCTAATAAAAATTGATGAATATAGTGTGAGGATGCATGACATGATTGAAGATATGGGTAGAGAAATTGTGAGACTGGAATCACCCTCAAAGCCAGGTGAACGCAGTAGATTATGGTTCTCCAAAGATATACTTCATGTTTTCAAAGAGAACAAGGGGTCTGATAAAACTGAGGTCATTGTGCTAAACCTACTCAAAGATAAAGAAGTCCAGTGGGATGGAAATGCATTTATGAATATGGAAAACCTCAAAATACTGGTAATAGAAAAAGCTCGCTTTTCCAGAGGACCTAATCATCTCCCAAAAAGTTTAAGAGTTCTGAAATGGTGTGATTATCCTGAATCGTCGTTGCCGGCTCATTATAATCCAAAGAAACTTGTCATGCTTGACTTGTCTATGGGCCTTTTTACATTCAGCAACCAAATGATCATGAAATTTAAATCTTTTAAGGAAATGAAGTTAAGCAAGTGTCAATCTTTAAAGCAAGTACCTGACATGTCTGGTGCTCCGAATTTGAAGAAACTGCATCTTGATTCCTGCAAGAATTTGGTTGAAGTTCATGATTCCGTTGGGTTCCTTGGAAAACTTGAAGATTTGAATCTTAATCGTTGCACTGGTCTCAAGATTCTTCCCCGTGGTATCAACTTACCTTCACTTAAAACCATGTCCCTTAGGAATTGTACATCTCTTGAGAATTTTCCAGAAATTCTAGGGAAGATGAAAAACATAACATACCTTGTTTTGAGTGATAGTGGGATATGTGATTTGCCCTTCTCCATTGGACTTCTTGTGGGGCTTGAAAAGCTGACTATAGACAGATGCAATAAGCTACTTGAATTACCAAGTAGTATTTTTATGTTGCCAAAACTTGATACTTTGGAGGCTTACTGTTGCAAGGGGCTTGCACAAATTACGAAGGGAAAAGGTCAAGTGCTGCCAGAAACACTGTCTTCAGATGTGATAAATGCTAGTTCTCGTTTGGTTCCTAGATATGTTGACTTGAGCTTTTGCTATTTGCCATATGAATTTCTTGCTACACTTCTGCCTTCATTGCACTATGTAACACATATATCCCTTGATTACAGCACCATCACAATCCTTCCTTCATGCATCAATGAATGTCATTCTTTGAAGCAACTTACTATGAATAATTGTATGGAGCTTCGAGAAATCAGAGGCCTGCCACCAAACATAAAATATCTTCATGCAATAAATTGTGAATCACTGACTTCTCAATCCAAGGAAATATTACTAAATCAGATGCTGCTCAATTCCGGGTTCGAAATCAAATATATCATTTATCCAGGATCAACTATCCCAAGTTTGTTCCATCAACATACATGTGAACCATCCCTGTCCTTCTGGTTCCGTAACAAATTGCCAGAAATGGCACTCTGTTTCGTCGGAGTTTTGGGTGGTTCCGTAACAAATTACCAGAAACGTCTTGTTGAGTATAATTTTGACCTGATCATTGATAGCAATCAACGAATCAGCAACATTTTCCATGTTGATTGGTTTGAAAATAGTTTATTTGACACAAATCATATATTTCTGCTAGATGTGCAGCTCAAAGCTAGCCTTGATATGATTGGAAAACTACATTTTGAGAATGGATGGAATCATGCTGAATTTCGGTTGATGAAAAATGGTGGCGAATATATGAAGCAGACGAGAGTTTATGTACAAGAACAAATGATAAACATGCCAGACATTCAATTTATAAATCCTGAGGTTCCAATAGGAAAAGAAAATAAATAA 3201 0.3718 MATMRKLKSSSSSSITYGWAYDVFLSFRGEDTRMGFTGNLYNALVGKGINTFIDDEELRKGEEITPALMMAIQQSRIAVVIFSENYASSTFCLEELRKIMECIKHKGRLVWPVFYKVDPSDVRHLKGSYAEALAKCKRKTFDTEKVKQWKLALQEAANLVGSHFKHGYEYKFIGKIIQEVSKKINRRPLHVAKYPVGLESRVQKLNSLLEVESDEGAQMVGIYGMGGLGKTTLACAIYNCIADQFDSLCFLGDIRENSMKRGLVQLQEMLLFELAGEKDLKLCSLNKGIPIIKSRLRGKKILLILDDVNSLEQLKALAGGLDWFGSGSRVIITTRDKHLLHVYGVKRVYEVEGFNCEEALELFVWNAFKSKEVDPSHLDISKKVVLYFNGLPLAVEIIGSDLYGRTILEWKSAIDTYERIPHDNIQEILRVSYDGLKEFEKEIFLDIACFFKGYKLTDVMNILCSGRGFAPDYAIQVLIDKSLIKIDEYSVRMHDMIEDMGREIVRLESPSKPGERSRLWFSKDILHVFKENKGSDKTEVIVLNLLKDKEVQWDGNAFMNMENLKILVIEKARFSRGPNHLPKSLRVLKWCDYPESSLPAHYNPKKLVMLDLSMGLFTFSNQMIMKFKSFKEMKLSKCQSLKQVPDMSGAPNLKKLHLDSCKNLVEVHDSVGFLGKLEDLNLNRCTGLKILPRGINLPSLKTMSLRNCTSLENFPEILGKMKNITYLVLSDSGICDLPFSIGLLVGLEKLTIDRCNKLLELPSSIFMLPKLDTLEAYCCKGLAQITKGKGQVLPETLSSDVINASSRLVPRYVDLSFCYLPYEFLATLLPSLHYVTHISLDYSTITILPSCINECHSLKQLTMNNCMELREIRGLPPNIKYLHAINCESLTSQSKEILLNQMLLNSGFEIKYIIYPGSTIPSLFHQHTCEPSLSFWFRNKLPEMALCFVGVLGGSVTNYQKRLVEYNFDLIIDSNQRISNIFHVDWFENSLFDTNHIFLLDVQLKASLDMIGKLHFENGWNHAEFRLMKNGGEYMKQTRVYVQEQMINMPDIQFINPEVPIGKENK* 1067
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1954 1066 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 184 447 IPR027417 -
Tpr2g1954 1066 PANTHER ARCHAEAL ATPASE 31 1028 - -
Tpr2g1954 1066 SUPERFAMILY L domain-like 538 900 - -
Tpr2g1954 1066 Gene3D Ribonuclease Inhibitor 519 695 IPR032675 -
Tpr2g1954 1066 SUPERFAMILY "Winged helix" DNA-binding domain 424 529 IPR036390 -
Tpr2g1954 1066 CDD AAA 222 336 - -
Tpr2g1954 1066 Pfam NB-ARC domain 200 433 IPR002182 GO:0043531
Tpr2g1954 1066 SMART till_3 20 159 IPR000157 GO:0007165
Tpr2g1954 1066 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 31 1028 IPR044974 GO:0006952
Tpr2g1954 1066 Gene3D - 353 441 IPR042197 -
Tpr2g1954 1066 Gene3D - 183 347 IPR027417 -
Tpr2g1954 1066 SUPERFAMILY Toll/Interleukin receptor TIR domain 10 161 IPR035897 -
Tpr2g1954 1066 ProSiteProfiles TIR domain profile. 19 184 IPR000157 GO:0007165
Tpr2g1954 1066 Gene3D Ribonuclease Inhibitor 698 904 IPR032675 -
Tpr2g1954 1066 PRINTS Disease resistance protein signature 219 234 - -
Tpr2g1954 1066 PRINTS Disease resistance protein signature 295 309 - -
Tpr2g1954 1066 PRINTS Disease resistance protein signature 388 402 - -
Tpr2g1954 1066 PRINTS Disease resistance protein signature 695 711 - -
Tpr2g1954 1066 Pfam TIR domain 20 185 IPR000157 GO:0007165
Tpr2g1954 1066 Gene3D - 20 182 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1954 Tpr-Chr2 23481494 23486068 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g1954 21 784 WRKY Transcription Factor Family AT4G12020 30.451 3.09e-85 301
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1954 - - mtr:MTR_5g040490 1743.4