Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1951 ATGGAAGAAAAAAATGATGGTGAAAAACTTGATGAAGTTATGTTACCAGGGTTTAGGTTTCATCCAACTGATGAAGAGCTTGTTGGTTTTTACCTAAAGAGAAAGGTTCAACAAAGGCCTCTTTCTATTGAGCTCATCAAACAGCTTGATATCTATAAATATGATCCTTGGGATCTTCCAAAGTTTGCTAGTACAGGAGAGAAAGAGTGGTATTTCTACTGTCCAAGAGACAGAAAATACAGAAACAGTGCAAGGCCTAATAGGGTAACTGGAGCTGGATTCTGGAAAGCTACAGGTACTGATAGACCTATCTATTCCTCAGAAGGTTCAAAGTGCATTGGCCTTAAGAAATCATTAGTCTTTTACAAAGGAAGAGCTGCTAAAGGAATCAAAACTGATTGGATGATGCATGAGTTTAGGCTACCTTCTCTCACTGATCCACTTTCACCTAAGAAGTACTTGGAGAAAACCATTCCTGCTAATGAATCATGGGCTATCTGCAGAATATTCAAGAAAACCAATTCTACAGCTCAAAGAGCTTTGTCTCAATCTTGGGTTTCTTCCCTTTCTGAAACAAGAACCTCTAATATACTAACTAAAAATCAAGAAATCACTCAATTTTGTTCTAACAACATGTTATTGACAAAGAAAACTACCTTAGCCGACAACTTTTGCCCTAACAACAATGATAACCAAAATTTTGATGTTACCCCTTACAAATCCAATATTAATCCATTACTCCACAAAGCCTTTGATAACTTATTACCAATATCATCAAATGAAGATCTTAATGCAAGCATGATATTCTCATCACCATCTCAACTACAAACATCTGATAACAATAATTTTATCTCCAAATCTACATTAGATGTTTCATCAATGTTGTTGAACATGTCATCCTCAACGTTTGGTGATGAGGTTACAACTACAAATTTCATGAATGGTGGGTTGCAAGAGCAATTTAGTGAGTACTACTCATTACCATATGGTAACAATTATGAAAATAATAATGCATTGGTAAAGGTACCTTATAATGTGAATGTGAATGTGCCTCGTATTGATGATGAACAAGAATTGATGCATTTCAATATTGGTGATGCATGGAAGTCAAATTTGCTTTGGGATACTTCATTTTGTCCTTGTGATGTTCCCTCTAGTTATTATTCTACAACAACCAAGTGTTACACTTAA 1191 0.3526 MEEKNDGEKLDEVMLPGFRFHPTDEELVGFYLKRKVQQRPLSIELIKQLDIYKYDPWDLPKFASTGEKEWYFYCPRDRKYRNSARPNRVTGAGFWKATGTDRPIYSSEGSKCIGLKKSLVFYKGRAAKGIKTDWMMHEFRLPSLTDPLSPKKYLEKTIPANESWAICRIFKKTNSTAQRALSQSWVSSLSETRTSNILTKNQEITQFCSNNMLLTKKTTLADNFCPNNNDNQNFDVTPYKSNINPLLHKAFDNLLPISSNEDLNASMIFSSPSQLQTSDNNNFISKSTLDVSSMLLNMSSSTFGDEVTTTNFMNGGLQEQFSEYYSLPYGNNYENNNALVKVPYNVNVNVPRIDDEQELMHFNIGDAWKSNLLWDTSFCPCDVPSSYYSTTTKCYT* 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1951 396 SUPERFAMILY NAC domain 13 172 IPR036093 GO:0003677|GO:0006355
Tpr2g1951 396 ProSiteProfiles NAC domain profile. 14 172 IPR003441 GO:0003677|GO:0006355
Tpr2g1951 396 PANTHER PROTEIN FEZ ISOFORM X1 1 392 - -
Tpr2g1951 396 Gene3D NAC domain 23 177 IPR036093 GO:0003677|GO:0006355
Tpr2g1951 396 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 1 392 - -
Tpr2g1951 396 Pfam No apical meristem (NAM) protein 16 141 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1951 Tpr-Chr2 23465474 23468216 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g1951 2 328 NAC Transcription Factor Family AT1G26870 53.982 7.95e-109 324
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Tpr2g1951 NAM 4.1e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1951 - - gmx:100783995 499.204
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g1951 2 23465474 23468216 Tpr2g1951 2 23465474 23468216 ECH