Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1947 ATGGATATCTCAGAGATCGCAAAGAAACTCGGATTCTCCGATTCCAAACTTCTCATCCGTAAAGCCGCCGAACTCCGTCGCCTCTGCGATGTTCATTTCGATTCCTCCATCATCGGCGTCGGTGAGGTTGCGAAAGCTATCATCTGTTTGGAAATTGCCGCAACTAGGCTCGGTGTTCTCTTCGATCGATCCGCTGCGGTGAAACTAAGTGGAATGTCTGAAAGAGCATATATTAGATCCTATAATTCACTTCACAATGGCATCGGAGTCAAGTTGAAGCTAGATGTGAGAGAATTGGCGATTCAATTCGGTTGTGTTCGGATTATACCTTATGTTCGTGACGGTCTCAAGCTTTATAAGGATCGGTTTCTTTCGTCGTTGCCGGCTGCTCGCCGTGCTAGTGCTGATTTTACTCGTCCGGTGTTTATGGCTGTTGCTTTTTATTTATGTGCAAAGAAACACAAGCTCAAAGTTGATAAGATTAAGCTAATTGAACTCTGTGGTACATCTGAAGCTGAATTTTCCAGTGTTTCTACTACTATGAAAGATTTGTGCCATGATGTTTTTGGGGTAGCTAAAGAAAAGAAAGATCCTAAAGAAGTTAAGACCAATAGAGTTCCTGTTTTTGCATTAAGTATGTTCTTTCCTGCTTTTCCTGCTCTTTGTGCAGATTTGCTTGATGTCTTGCCAAGCAAAAGAAAAGCTGAGGACGGTGGCTATTTGTCTGATGATGGAGCAGAGGTTTCAAGTTATAAAAAAAGGAAACAGACAGAAACACGTGATTATGAGAAGTGGAAATCTTCAGTCCTTACATCCAACAAACAAGATAAGAAAGAAGTGCCTAGCAAGAAACCAATACAGACTCGCCTCAACTTTGTTAAGGAAACTCCTGAGATCCAGAAGTTGGAGGCAATGTAA 918 0.4194 MDISEIAKKLGFSDSKLLIRKAAELRRLCDVHFDSSIIGVGEVAKAIICLEIAATRLGVLFDRSAAVKLSGMSERAYIRSYNSLHNGIGVKLKLDVRELAIQFGCVRIIPYVRDGLKLYKDRFLSSLPAARRASADFTRPVFMAVAFYLCAKKHKLKVDKIKLIELCGTSEAEFSSVSTTMKDLCHDVFGVAKEKKDPKEVKTNRVPVFALSMFFPAFPALCADLLDVLPSKRKAEDGGYLSDDGAEVSSYKKRKQTETRDYEKWKSSVLTSNKQDKKEVPSKKPIQTRLNFVKETPEIQKLEAM* 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1947 305 CDD Orc6_mid 93 188 - -
Tpr2g1947 305 Gene3D - 92 188 - -
Tpr2g1947 305 MobiDBLite consensus disorder prediction 248 289 - -
Tpr2g1947 305 MobiDBLite consensus disorder prediction 248 284 - -
Tpr2g1947 305 Pfam Origin recognition complex subunit 6 (ORC6) 4 91 IPR008721 GO:0003677|GO:0005664|GO:0006260
Tpr2g1947 305 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 6 1 206 IPR020529 GO:0005664|GO:0006260
Tpr2g1947 305 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 6 224 296 IPR020529 GO:0005664|GO:0006260
Tpr2g1947 305 PANTHER BNAC05G50940D PROTEIN 1 206 - -
Tpr2g1947 305 PANTHER BNAC05G50940D PROTEIN 224 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1947 Tpr-Chr2 23397286 23400367 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g1947 1 300 Core DNA Replication Machinery Family AT1G26840 62.914 5.83e-130 369
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1947 K02608 - gmx:100777539 457.988
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g1947 2 23397286 23400367 Tpr2g1947 2 23397286 23400367 ECH