Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1946 ATGGTCTTAGAGACTCTTGAGTTCAAAAAGAATGTTGCATACGGTGCAGCTGTTCAAGCTGCTATTTTGAGTAAAGGCTTTCAAAATGTCCCAAACTTGGTGCTGCGAGATGTTACCCCGTTATCACTTGGAACACTTCCATACCTGTCAAGAAGACAAAAATATTTCACTCGGGACAACAGTTGTAAAGTCTCGATTAAGGTTTATGAGGGTGAGAGAGCAAGGGACACAGACAACAATCTGCTTGGCTTCTTCACCCTTTCTTGCCCTCCGGGTACTCCTCGTGGTCAGCCTTTGGAGGTATGCTTTGCCATTGATGAAAATGGTATCCTAACTGTTTCTGCAAAGGAAATATCCTCAGGCAATATGAACGAGATCACTATAACCAATGACAAAGAAAGGTTATCAGCATTTGAAATTAGAAAAATGATTGAAGAAGCTGAGAGGTATCATGTAGAAGATCAGAAATTCTTAAGGAAGGCCAGAGTATTGAGTGAATTGGATTTATGTGTTTACAAAATGAAGAATGCTAAAATGAAGAATGATGTTAATCTAAAGCTCTCCCCTCAAGAAAGTGAGAAGATCAACAATGCAATTACTGTGGCCACGGATTTGCTTGATAAGAATAACCAACAGAAAGAAGTAGATGTTCTTGAGGTTCATCTAAAAGAGCTGGAGAGCATGTTGCAACGCCTTATATCCATGACTGAGTAG 714 0.3992 MVLETLEFKKNVAYGAAVQAAILSKGFQNVPNLVLRDVTPLSLGTLPYLSRRQKYFTRDNSCKVSIKVYEGERARDTDNNLLGFFTLSCPPGTPRGQPLEVCFAIDENGILTVSAKEISSGNMNEITITNDKERLSAFEIRKMIEEAERYHVEDQKFLRKARVLSELDLCVYKMKNAKMKNDVNLKLSPQESEKINNAITVATDLLDKNNQQKEVDVLEVHLKELESMLQRLISMTE* 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1946 237 PRINTS 70kDa heat shock protein signature 6 26 - -
Tpr2g1946 237 PRINTS 70kDa heat shock protein signature 32 51 - -
Tpr2g1946 237 PRINTS 70kDa heat shock protein signature 96 112 - -
Tpr2g1946 237 Gene3D - 164 236 IPR029048 -
Tpr2g1946 237 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 28 163 IPR029047 -
Tpr2g1946 237 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 166 233 IPR029048 -
Tpr2g1946 237 PANTHER HEAT SHOCK PROTEIN 70KDA 5 234 IPR013126 GO:0005524|GO:0140662
Tpr2g1946 237 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 29 161 IPR029047 -
Tpr2g1946 237 Coils Coil 208 235 - -
Tpr2g1946 237 Pfam Hsp70 protein 8 234 IPR013126 GO:0005524|GO:0140662
Tpr2g1946 237 PANTHER HEAT SHOCK 70 KDA PROTEIN 5 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1946 Tpr-Chr2 23393201 23394045 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g1946 12 234 Calmodulin-binding Proteins AT3G12580 46.502 8.34e-54 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1946 K03283 - gmx:102667578 253.062