Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1942 ATGGATTTCAACACCCCAATACGATCCAACACCACGCCCCTCTCCAATCCAGTCTTCAAATCTAAACTCATTTTCTTAAACGAATGGTGGCTCATGAAGCCTCAAAACCAGTGCAAGGGTTTAGCTCTTGCTGGCATTGCTTCAATGGAGAGAGAAAGAATGTTTCTATCTTCTGTGATTGTAAAGAGACATGAACCCAATGTTGTAGAGACTGAAGATGGCATCACAATAATCTTCCGTGGTTTTATTAACTCCTCTCGTACATCTCAAAATGGATTTCCCTCCGATGTATGTCGCCGGTTCTCAGTTGGATTTCCACACAATTGGAAAAATTATTTTGTTCATAGTTCAGGAAATGAATGTATTGATGTGGATAAAGTTACCGGTTTTGATGACTCAAATGCTTCTTCCCACAAAAAAACAGCTGAAGAGACTTCACAGGAAGTTATGGAAGCTGAAGATAACGGAAATATTGTGAGTATTAGGTTGCCTCAACCGCAGGTTGGCATGGTTGATAATGGTGAAAATGTAGTCTCAGATGTTAACGACTTACATGCTTCTTCCCACCTAAAAACAGCTGATGTGGCTTCGCATGAAGCTATGGAAGCCGAAGATAAAGACAATATTGCGAGTCTTAGGTTGTCTCAACCGCTGGTCAACGTGGGTTATAATGGTGAAAATAGAGTCTCGGATGTAGATGACTTGAATGCTTCTTGCCACAAAAACACAGCTCATGTGATTTCACATGAACCTATGGTAGCTGAAGCTAACGTCAATATCGGGAGTCTTAGGTTATCTCAACCGCAGGTTGATTTGATTAATAATGGTGAAAACGGAGTCTCAATTGTTGCAGCAGCTGAAAGTAGACAATCTTTGATGAGGGTGTTTGAATTTGATCCTATTCATGAGCAAAGCAATGTTAGGTCTCCACTTAACCCAAAGAAATTGGAATTTGAACAGTTATCAAGTGACCGCAAGGAGAAAAAACGTATCAAGAAGAAGATTGTAGAGGATACAAGTAGTTTGTGTAAAAAGGTGCTGACAAGAAGCATTGCCAAAAAAAGTCACATGATGCGTAAAAGGGATGTGAAAGCTGAAGTAAAATGTTCTAGTAGTCCTGTTAGAAGATCTCCCAGGGTACTTAATTATGGAAAAAAAAATTAG 1164 0.3969 MDFNTPIRSNTTPLSNPVFKSKLIFLNEWWLMKPQNQCKGLALAGIASMERERMFLSSVIVKRHEPNVVETEDGITIIFRGFINSSRTSQNGFPSDVCRRFSVGFPHNWKNYFVHSSGNECIDVDKVTGFDDSNASSHKKTAEETSQEVMEAEDNGNIVSIRLPQPQVGMVDNGENVVSDVNDLHASSHLKTADVASHEAMEAEDKDNIASLRLSQPLVNVGYNGENRVSDVDDLNASCHKNTAHVISHEPMVAEANVNIGSLRLSQPQVDLINNGENGVSIVAAAESRQSLMRVFEFDPIHEQSNVRSPLNPKKLEFEQLSSDRKEKKRIKKKIVEDTSSLCKKVLTRSIAKKSHMMRKRDVKAEVKCSSSPVRRSPRVLNYGKKN* 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1942 387 Pfam SANTA (SANT Associated) 24 112 IPR015216 -
Tpr2g1942 387 MobiDBLite consensus disorder prediction 354 387 - -
Tpr2g1942 387 PANTHER TRANSCRIPTION REGULATOR OTHERS FAMILY-RELATED 9 232 - -
Tpr2g1942 387 PANTHER TRANSCRIPTION REGULATOR OTHERS FAMILY-RELATED 236 384 - -
Tpr2g1942 387 PANTHER MIS18-BINDING PROTEIN 1 9 232 IPR039110 -
Tpr2g1942 387 PANTHER MIS18-BINDING PROTEIN 1 236 384 IPR039110 -
Tpr2g1942 387 Coils Coil 135 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1942 Tpr-Chr2 23375670 23379822 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Tpr2g1942 SANTA 4.3e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1942 - - mtr:MTR_5g040080 448.358