Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1936 ATGAACGTGGATCTGGAATCCTTGGCAGAAGCCACTTCTGGAGCCATAGGATCATTGCTTAGCACAACAATTCTCTACCCACTTGATACCTGCAAAACTAAGTATCAAGCTGAGGCACGTTCTCATGGTAACAGAAAGTACAAGAATCTCTCTGATGTGTTATGGGAGGCGATATCTAACCGTCAGATTCTTTCGCTTTACCAGGGCCTTGGAACAAAAAATCTTCAATCCTTTTTTTCACAGTTTGTCTACTTCTATGGTTATAGTTACTTTAAAAGACTGTATCTTGAAAAAAGTGGATATAAATCCATTGGAACAAGAGCAAACTTGTTAATTGCTGCTGCTGCTGGGGCTGTCACAGCCATTACAACTCAGCCCCTGGATACAGCCTCTTCAAGGATGCAGACAAGTGCTTTTGGAAAATCTAAAGGGCTACTGAAAACCCTTACGGAAGGCACATGGAGTGATGCATTTGATGGCCTTAGCATTTCCTTGATGCTCACCACAAACCCTGCAATTCAGTATACAGTGTTTGATCAGCTGAAAAACCGAGTACTGACAAATAACCAAAACATATCCGAGAAAGGAGTATCTCCAACATCACTGTCTGCATTTATGGCCTTCCTTTTAGGTGCAATTTCGAAGAGTATTGCTACCTGTCTAACGTATCCTGCTATCAGGTGCAAAGTAATCATTCAAGCTGCAGACGCGGATGAAGAATCTTCTAAAAAACTGATAAAATCACCGAAAACCGTGTCCAGCGTTCTCTATGGAATATGGAAAAAGGAGGGAGTTTTGGGCTATTTTAAAGGATTACATGCTCAGATATTGAAAACTGTTTTGAGCTCGGCATTGCTCTTGATGATCAAGGAGAAGATCTCTGCTACTACTTGGGTCCTTATACTTGCAATTAAAAGGTATCTCTTACTCCCAAAGAGTAGTAGGGTTAAGAACTTGTAA 960 0.4104 MNVDLESLAEATSGAIGSLLSTTILYPLDTCKTKYQAEARSHGNRKYKNLSDVLWEAISNRQILSLYQGLGTKNLQSFFSQFVYFYGYSYFKRLYLEKSGYKSIGTRANLLIAAAAGAVTAITTQPLDTASSRMQTSAFGKSKGLLKTLTEGTWSDAFDGLSISLMLTTNPAIQYTVFDQLKNRVLTNNQNISEKGVSPTSLSAFMAFLLGAISKSIATCLTYPAIRCKVIIQAADADEESSKKLIKSPKTVSSVLYGIWKKEGVLGYFKGLHAQILKTVLSSALLLMIKEKISATTWVLILAIKRYLLLPKSSRVKNL* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1936 319 ProSiteProfiles Solute carrier (Solcar) repeat profile. 104 184 IPR018108 -
Tpr2g1936 319 PANTHER PEROXISOMAL ADENINE NUCLEOTIDE TRANSPORTER 1 1 317 IPR045900 GO:0005347|GO:0006635|GO:0015217
Tpr2g1936 319 Gene3D Mitochondrial carrier domain 3 297 IPR023395 -
Tpr2g1936 319 PANTHER PEROXISOMAL ADENINE NUCLEOTIDE CARRIER 1 1 317 - -
Tpr2g1936 319 Pfam Mitochondrial carrier protein 202 294 IPR018108 -
Tpr2g1936 319 Pfam Mitochondrial carrier protein 104 188 IPR018108 -
Tpr2g1936 319 Pfam Mitochondrial carrier protein 6 98 IPR018108 -
Tpr2g1936 319 SUPERFAMILY Mitochondrial carrier 7 292 IPR023395 -
Tpr2g1936 319 ProSiteProfiles Solute carrier (Solcar) repeat profile. 5 94 IPR018108 -
Tpr2g1936 319 ProSiteProfiles Solute carrier (Solcar) repeat profile. 202 296 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1936 Tpr-Chr2 23298756 23302743 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g1936 23 315 Chloroplast and Mitochondria Gene Families AT1G25380 25.890 7.94e-13 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1936 - - gmx:100787682 528.865