Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1934 ATGGAATTGGAAGGTGATCATCAAAATAATGGAATCCGAAGCAGACCCAATTTCCCTCTTCAGCTTTTAGAGAAAAAAGATAACAATATCCTAGATGTCTCCGAAGAACAACAACTTTGTTCAAACACCGCAAACGACGGCTCAGGCACCATCATCACATCAGACAGCCAGAAAAAGCCAGCGCCAAAGCGGGCCTCGACGAAAGACCGGCATACAAAAGTGGACGGACGAGGCCGCCGGATCCGCATGCCGGCGGCCTGTGCAGCTAGAGTGTTCCAGCTCACGCGTGAGCTGGGACATAAATCAGACGGTGAGACGATCGAGTGGCTACTTCAACAAGCAGAGCCAGCTGTCATCGCCGCCACCGGTACAGGAACAATTCCGGCCAACTTTACTTCTCTTAACATCTCTCTTAGAAGCTCAGGTTCAACTATGTCAGCGCCATCACACTATTTTAGAGGTAACTACTTCAACCCTAGCTCGTTTTCAACCGCGGCAGCCGCGGCGGCTCAGCTTAGAAACCGAGCTGAATGGGACAGAACTATGAACATGAATATGAACGTTACAGCTGATGATTCTAGAAGGAATAACAATATGATGGAGAATCCTTCATCTTTATCAGCAATTTTGAATTTCAACAACGTGCAAAATGCTATTCTACAAGCAAAACAAGAGCTCCGGGAAGAAAACGCAACCGGAGGCGGCGGCGGTGGTGGAGGTTTTGATTTATTGGGTTCTGATTCTGATGGAAGCATAGGGAGGAAAAGAAGGTCAGAGCAAGAATTGTTATCACAAAATATGGGAAGTTATTTGTTACAATCAAATGTGGGGTCACTTCCTTCAAGTCATGCTTCCAATACGGCAGCGTTTTGGATGGTAACAGGTAATGGTAACCAAAGTGTTAATGGTGGTGGTAATGGAAATGATCCAATTTGGGCAATTCCTTCTGTTGGGAATAATGGTTTGTATAGAGGAGCTATGCCTTCTAATGGAATTCATTTCATGAATTTTGCTTCTCCAATGAATCTTATGCCTGGAAGTCAATTAGGTTCTGGACTTGTCGGCGGTGGTGGTGGAGGTGGTACTGGTATTATGGCCGAAAGTAATTTAAGTATGCTTTCGGCCATGAATGCCTATAGGCAGATTCAGACAAATGGCATGTCCGAGTCGCCGGGGCAACATCATGGAGGAGGAGGAGGAGATGATGGACCTGATGACTCGAGCAGTCAACAATCCTAA 1239 0.4617 MELEGDHQNNGIRSRPNFPLQLLEKKDNNILDVSEEQQLCSNTANDGSGTIITSDSQKKPAPKRASTKDRHTKVDGRGRRIRMPAACAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFTSLNISLRSSGSTMSAPSHYFRGNYFNPSSFSTAAAAAAQLRNRAEWDRTMNMNMNVTADDSRRNNNMMENPSSLSAILNFNNVQNAILQAKQELREENATGGGGGGGGFDLLGSDSDGSIGRKRRSEQELLSQNMGSYLLQSNVGSLPSSHASNTAAFWMVTGNGNQSVNGGGNGNDPIWAIPSVGNNGLYRGAMPSNGIHFMNFASPMNLMPGSQLGSGLVGGGGGGGTGIMAESNLSMLSAMNAYRQIQTNGMSESPGQHHGGGGGDDGPDDSSSQQS* 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1934 412 Coils Coil 212 232 - -
Tpr2g1934 412 MobiDBLite consensus disorder prediction 61 79 - -
Tpr2g1934 412 Pfam TCP family transcription factor 66 213 IPR017887 -
Tpr2g1934 412 MobiDBLite consensus disorder prediction 41 60 - -
Tpr2g1934 412 ProSiteProfiles TCP domain profile. 67 121 IPR017887 -
Tpr2g1934 412 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 8 411 IPR005333 GO:0003700
Tpr2g1934 412 PANTHER TCP FAMILY TRANSCRIPTION FACTOR 8 411 - -
Tpr2g1934 412 MobiDBLite consensus disorder prediction 41 79 - -
Tpr2g1934 412 MobiDBLite consensus disorder prediction 385 412 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1934 Tpr-Chr2 23241437 23243229 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g1934 1 136 TCP Transcription Factor Family AT1G69690 67.647 1.27e-51 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Tpr2g1934 TCP 4e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1934 - - gmx:100809966 478.789
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g1934 2 23241437 23243229 Tpr2g1934 2 23241437 23243229 ECH
Tpr2g1934 2 23241437 23243229 Tpr5g3029 5 53214845 53217132 PCT