Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1929 ATGTGGAGCTTAGGATTCAATATTTTGATTAGGGTTTCTATTTTGCTCTCATTTACATCTTTAATTTCTTCCTTCGAACCCCAACTCGGATCAACCCGCGTCGTTTTTCAGACAAATTATGGAGATATTGAATTTGGTTTCTATCCAACTGTTGCACCCAAAACTGTTGATCACATTTTTAAGCTTGTGAGACTTGGAGGCTATAATACCAATCATTTCTTCCGGGTGGATAAGGGATTTGTAGCTCAAGTAGCTGATGTTGCTAATGGAAGATCTGCTCCCATGAACGAGGAACAAAGAAGAGAAGCTGAAAAGACTGTTGTTGGCGAATTTAGTGATGTCAAACATGTTCGGGGTATTCTTTCTATGGGAAGGTATGACGATCCAGATAGTGGTTCATCCTCTTTTTCAATGTTACTTGGAAATTCTCCTCATCTTGATGGGAAGTATGCAATATTTGGAAAAGTTACTAAAGGTGACGATACATTGGCAAAGCTTGAGCAACTACCTACCCGTAAAGAAGGAATATTTGTCATGCCAACGGAGCGCATCACCATCCTCTCATCATATTACTATGACACGGAGACAGAAAATTGTGAGCAAGACAGATCGATTTTGAAGCGCAAGTTAGCTGCATCAGCCATTGAAGTTGAAAGACAGAGAATGAAATGCTTCCCCTAA 681 0.3994 MWSLGFNILIRVSILLSFTSLISSFEPQLGSTRVVFQTNYGDIEFGFYPTVAPKTVDHIFKLVRLGGYNTNHFFRVDKGFVAQVADVANGRSAPMNEEQRREAEKTVVGEFSDVKHVRGILSMGRYDDPDSGSSSFSMLLGNSPHLDGKYAIFGKVTKGDDTLAKLEQLPTRKEGIFVMPTERITILSSYYYDTETENCEQDRSILKRKLAASAIEVERQRMKCFP* 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1929 226 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 47 62 IPR002130 GO:0000413|GO:0003755
Tpr2g1929 226 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 73 85 IPR002130 GO:0000413|GO:0003755
Tpr2g1929 226 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 119 134 IPR002130 GO:0000413|GO:0003755
Tpr2g1929 226 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 148 163 IPR002130 GO:0000413|GO:0003755
Tpr2g1929 226 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP23 14 226 IPR044233 -
Tpr2g1929 226 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 34 188 IPR002130 GO:0000413|GO:0003755
Tpr2g1929 226 Gene3D - 22 199 IPR029000 -
Tpr2g1929 226 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 35 191 IPR002130 GO:0000413|GO:0003755
Tpr2g1929 226 CDD cyclophilin 35 188 - -
Tpr2g1929 226 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP23 14 226 - -
Tpr2g1929 226 SUPERFAMILY Cyclophilin-like 27 193 IPR029000 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g1929 34 192 U-box Gene Family AT5G67530 27.545 1.89e-10 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1929 - - gmx:100819238 397.512
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g1929 2 23172820 23180411 Tpr2g1929 2 23172820 23180411 ECH