Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1919 ATGGGTAATTGTCTTGATTCTTCTGCTAAAGTTGATGCAGCTCAAAGTTCTAGATCCACTTCTGCGATCTCAAAAAGTACTCCATCTAGTTTAACCATTCCATCATACAGTGACAAAAGCAATTCCTCGAGTCTTCTTCCAACACCAAGATCCGAGGGTGAAATCTTGTCTTCTCCAAATCTTAAAGCTTTTGCATTCAATGAGCTAAAGAACGCCACGAGGAATTTTCGTCCCGATAGTCTTCTTGGTGAAGGCGGATTTGGTCATGTTTATAAGGGATGGATAGATGAACACACCTATACGGCTGCAAAACCTGGATCAGGAATGGTTGTTGCTGTTAAAAGACTTAAGCCCGAAGGTTTCCAAGGTCATAAGGAGTGGTTGACTGAAGTTAACTACCTTGGACAACTGCACCATCCTAATTTGGTAAAATTAATCGGGTACTGCTTGGAAGGAGAAAACCGGCTATTAGTATATGAGTTTATGCCTAAAGGGAGCTTAGAGAACCATTTATTTAGAAGAGGACCACAACCACTATCTTGGTCAATAAGGATGAAAGTAGCTATTGGTGCTGCTAGAGGACTCTCTTTTCTTCACAATGCAAAATCGCAAGTCATATACCGCGATTTCAAAGCTTCTAACATCCTTTTGGACGCGGAGTTTAATTCTAAACTATCTGATTTTGGCTTGGCTAAGGCGGGTCCTACCGGTGATAGAACTCACGTGTCTACTCAAGTTATGGGTACTCAAGGATATGCCGCACCTGAATATGTTGCAACTGGTCGGCTGACGGCCAAGAGTGATGTATACAGCTTTGGAGTTGTTATGCTTGAACTTTTATCCGGAAGACGTGCTGTCGATAAAACAATAGCTGGTGTTGACCAGAATCTAGTAGACTGGGCAAAACCATATTTAGGCGATAAAAGAAGACTATTCCGAATCATGGATTCCAAATTAGAAGGCCAATATCCACAAAAAGGAGCATTCATGGCTGCTACACTTGCACTACAATGCCTTAACAGAGAAGCGAAGGCAAGGCCTGCAATGATAGATGTTTTAGCAACTCTCGAACAGATAGAAGCACCTAAACATGCACCTCGGATTTCCTTATCAGACCATCAGAGACTCCATGCTCCTGTGAGAAGGTCTCCTGCTCGAAACCGGACGCCTTCAAATGTTACTCCTACTGCATCGCCACTGCCATCTGTTCGGCAATCTCCTCGTGCGCGCTAA 1233 0.4331 MGNCLDSSAKVDAAQSSRSTSAISKSTPSSLTIPSYSDKSNSSSLLPTPRSEGEILSSPNLKAFAFNELKNATRNFRPDSLLGEGGFGHVYKGWIDEHTYTAAKPGSGMVVAVKRLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWSIRMKVAIGAARGLSFLHNAKSQVIYRDFKASNILLDAEFNSKLSDFGLAKAGPTGDRTHVSTQVMGTQGYAAPEYVATGRLTAKSDVYSFGVVMLELLSGRRAVDKTIAGVDQNLVDWAKPYLGDKRRLFRIMDSKLEGQYPQKGAFMAATLALQCLNREAKARPAMIDVLATLEQIEAPKHAPRISLSDHQRLHAPVRRSPARNRTPSNVTPTASPLPSVRQSPRAR* 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1919 410 SUPERFAMILY Protein kinase-like (PK-like) 46 356 IPR011009 -
Tpr2g1919 410 PANTHER OS01G0588500 PROTEIN-RELATED 10 408 - -
Tpr2g1919 410 CDD STKc_IRAK 82 359 - -
Tpr2g1919 410 PANTHER PROTEIN KINASE 2B, CHLOROPLASTIC 10 408 - -
Tpr2g1919 410 Pfam Protein tyrosine and serine/threonine kinase 80 354 IPR001245 GO:0004672|GO:0006468
Tpr2g1919 410 ProSiteProfiles Protein kinase domain profile. 76 359 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g1919 410 Gene3D Phosphorylase Kinase; domain 1 52 161 - -
Tpr2g1919 410 MobiDBLite consensus disorder prediction 1 53 - -
Tpr2g1919 410 Gene3D Transferase(Phosphotransferase) domain 1 162 377 - -
Tpr2g1919 410 MobiDBLite consensus disorder prediction 385 410 - -
Tpr2g1919 410 MobiDBLite consensus disorder prediction 364 410 - -
Tpr2g1919 410 ProSitePatterns Serine/Threonine protein kinases active-site signature. 205 217 IPR008271 GO:0004672|GO:0006468
Tpr2g1919 410 MobiDBLite consensus disorder prediction 9 53 - -
Tpr2g1919 410 ProSitePatterns Protein kinases ATP-binding region signature. 82 114 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1919 Tpr-Chr2 22997509 23001397 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g1919 54 356 Glycoside Hydrolase AT3G07070 53.268 1.38e-111 332
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Tpr2g1919 PK_Tyr_Ser-Thr 2.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1919 - - gmx:100809778 719.924
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g1919 2 22997509 23001397 Tpr2g1919 2 22997509 23001397 ECH
Tpr2g1919 2 22997509 23001397 Tpr5g3023 5 53174789 53177164 PCT