Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1918 ATGGGGAAAGGAAGAAGTCCCGGGAAATGGATCAAGAACTTACTCTATGGGAAGAAATCATCGTCTAACTCGAAGTCTAGTTCATCGAAGAAAAATGACATTTTTAAATCTTCGAGTAACAAGGATCCGTTGGGATCTTCTGAGTTAATTGTGTCAAATCCAATTCCAACTATGGATTCTTTGATGATATCACCGCCGATATCTGGATCTAATGCTGGTAAAGGAGTGCTTTCAGAAAAGGAAGTAGTTAAAGGGCCATCTCGTGAGAGGGAAATTCTTTCAAATGGAGACGGAGAGGGTCGTGCACAGGCTGTTGCTAATTTTGCATCTCAAGATGATCTCGAGACAGTCAGGCTTACAGAAGCAGCTATTAAACTTCAGTCTGCTTGCAGAGGCTATCAGGCTCGTCGGGAATTTCAAACACTCAAAAGTATCACACAGCTGCAAGCTCTTATTCGCGGTCACTTGGTTAGAAGACAAGCTGTTTCTGCTTTATATTGTGTGAAGAGAATTGTTAAGTTCCAAGCATTGGCTCGTGGTTACAATGTTAGGCGTTCTGATATTGGGCTGGAGGTTCTGAAAATTCGTAAGGATACTCAACTTTCAAAATCTATTGGCATAGTTACATCTACAGAAGCAGAGAAGCTGTCAGAAAATGTCTTTGTTCGCAAGGTGCTGGCTTCATCGCCCCATGCTTTTCCTCTATCTTTCAATACTGATCTCGGAGAACCTTACTTGGCTTGGAAGTGGCTTGACCGATGGACAAGGTCACACTTTTGGGCATCTCTTCCTAAATTGAAGAACCTTGACTCGGTGTCTGATGAAAAAAATATCAGTTGTCAAACAGCTGAAAAGGGACAAGTTAAAAGGAATTCCCGGAAGTCTCCTGCGGTGAAAGCTGATGATGGCTCAAGTTCAGGTTTTAACAAATATAAACAGCGTCCCAAAAAGGATTCAAATCACTCATTGGTTTCAGCTCAGGAGCACCCAAAGAAAGACATTGAGAAAACTACTCTAAAAAAAACTCGCATGCAAAATGTTTCAGACAGATCTGAGGCAGTTAATGAGAAAAGAAAACTAAGCTCTAAGACAACTACAGATCATAATGTTACTGATGTCTCAGAGCAGGGGCCAAATTCCTCTTCAGAGAAAATGAAAGATACGATGGTGCCAAAGTCAGAAGAGTCTTATCCTGAGAAAGTTCTTGGACAGAGAACACCAGAAGAGAATAATGATAAGCCAAAGAAGAGCTTAAATGGTGGTGTCAAAGAAGAGAAAGGTCTTGGACAGAAAACACCAGAAGAGAATAATGATAAGCCAAAGAAGAGCTTTAATGGCATTACCAAAGAAGAGAAAGGTCTTGGAAAAAAAGCACTAGAAGAGAATAGTGATAAGCCAAAGAAGAGTTTAAATGGCAGTGCCAAAGAAGAGAAAGGTCTTGGAAAAAAAGCACTAGAAGAGAATAGTGATAAGCCAAAGAAGAGTTTAAATGGCAGTGCCAAAGAAGAGAAAGGTCTTGGACATAAAACACTAGAAGAGAATAGTGATAAGCCAAAGAAGAGTTTAAATGCCAGTGCCAAAGAAGAGAAAGGTCTTGGACAGAAAGCATTAGAAGAGAAAAGTGATAAGCCAAAGAAGAGTTTAAATGGCAGTGCCAAAGAGAAAAGTCTTGGACAGCAAGCACTAGAAGAGAATAATGATAAGCCAAAGAGCTTAAATGGCAGTGCCAAAGAAGAGAATGTTCCTGAACAGAAAGCACTAGAAGAGAATAATGATAAGCCAAAGAAGTGCTTAAGTGGCGGTGCCAAAGAAGAGAAAAGTCGTGGAAAGAAAGCACTAGAAGAGATAGGGCATAACGATCCTACTGCTGTCTTACAGACTAGTGTGAAGAATGTAGGAGATGAAAAAATAGGAGTTAGCGAAGACTTAAATGGCGGTGACAAAATCATCAGCAACAATTACCAAAGAAGAGCTTCACTGCCTGCTAATTTTAATGATCAAGAAAATGAGTTACATAACACTCCAAGATTGCCGAGTTATATGGCTCCTACTGAATCAGCAAAAGCTAGGCTAAGGGGACAAGGCTCCCCAAGATTTGCTACTGATGTCTTAGACAAAAACAGTTTTACCAGGAGGCATTCACTTTCATCTTCTATTAACAGCAAGTCAGGTTCTTTTTCCCCAAGACCAGAAAAGCTGATAACTTTGAGTGGAAGAGGAGTTGGGAGGACTGATAAATCTCTGTCATCTTCAAGGGACAAATCTTTGTCATCTTCAAGGGATGGGACTGATAAGTTGACACAACCTCAGTGGAGAAGGTGA 2322 0.4057 MGKGRSPGKWIKNLLYGKKSSSNSKSSSSKKNDIFKSSSNKDPLGSSELIVSNPIPTMDSLMISPPISGSNAGKGVLSEKEVVKGPSREREILSNGDGEGRAQAVANFASQDDLETVRLTEAAIKLQSACRGYQARREFQTLKSITQLQALIRGHLVRRQAVSALYCVKRIVKFQALARGYNVRRSDIGLEVLKIRKDTQLSKSIGIVTSTEAEKLSENVFVRKVLASSPHAFPLSFNTDLGEPYLAWKWLDRWTRSHFWASLPKLKNLDSVSDEKNISCQTAEKGQVKRNSRKSPAVKADDGSSSGFNKYKQRPKKDSNHSLVSAQEHPKKDIEKTTLKKTRMQNVSDRSEAVNEKRKLSSKTTTDHNVTDVSEQGPNSSSEKMKDTMVPKSEESYPEKVLGQRTPEENNDKPKKSLNGGVKEEKGLGQKTPEENNDKPKKSFNGITKEEKGLGKKALEENSDKPKKSLNGSAKEEKGLGKKALEENSDKPKKSLNGSAKEEKGLGHKTLEENSDKPKKSLNASAKEEKGLGQKALEEKSDKPKKSLNGSAKEKSLGQQALEENNDKPKSLNGSAKEENVPEQKALEENNDKPKKCLSGGAKEEKSRGKKALEEIGHNDPTAVLQTSVKNVGDEKIGVSEDLNGGDKIISNNYQRRASLPANFNDQENELHNTPRLPSYMAPTESAKARLRGQGSPRFATDVLDKNSFTRRHSLSSSINSKSGSFSPRPEKLITLSGRGVGRTDKSLSSSRDKSLSSSRDGTDKLTQPQWRR* 774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1918 773 MobiDBLite consensus disorder prediction 671 773 - -
Tpr2g1918 773 MobiDBLite consensus disorder prediction 16 47 - -
Tpr2g1918 773 MobiDBLite consensus disorder prediction 311 365 - -
Tpr2g1918 773 MobiDBLite consensus disorder prediction 710 730 - -
Tpr2g1918 773 Gene3D - 116 166 - -
Tpr2g1918 773 MobiDBLite consensus disorder prediction 281 629 - -
Tpr2g1918 773 MobiDBLite consensus disorder prediction 1 47 - -
Tpr2g1918 773 Pfam Protein of unknown function (DUF4005) 667 735 IPR025064 -
Tpr2g1918 773 Pfam IQ calmodulin-binding motif 143 160 IPR000048 GO:0005515
Tpr2g1918 773 Pfam IQ calmodulin-binding motif 120 140 IPR000048 GO:0005515
Tpr2g1918 773 Pfam IQ calmodulin-binding motif 169 185 IPR000048 GO:0005515
Tpr2g1918 773 MobiDBLite consensus disorder prediction 581 617 - -
Tpr2g1918 773 SMART iq_5 141 162 IPR000048 GO:0005515
Tpr2g1918 773 SMART iq_5 118 140 IPR000048 GO:0005515
Tpr2g1918 773 SMART iq_5 166 188 IPR000048 GO:0005515
Tpr2g1918 773 ProSiteProfiles IQ motif profile. 119 147 IPR000048 GO:0005515
Tpr2g1918 773 MobiDBLite consensus disorder prediction 387 550 - -
Tpr2g1918 773 ProSiteProfiles IQ motif profile. 143 170 IPR000048 GO:0005515
Tpr2g1918 773 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 414 - -
Tpr2g1918 773 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 460 755 - -
Tpr2g1918 773 PANTHER IQ-DOMAIN 5-RELATED 1 414 - -
Tpr2g1918 773 PANTHER IQ-DOMAIN 5-RELATED 460 755 - -
Tpr2g1918 773 MobiDBLite consensus disorder prediction 751 773 - -
Tpr2g1918 773 MobiDBLite consensus disorder prediction 552 569 - -
Tpr2g1918 773 MobiDBLite consensus disorder prediction 366 386 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1918 Tpr-Chr2 22889839 22896870 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g1918 655 773 IQD Protein Family AT1G14380 45.082 1.32e-19 91.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1918 - - mtr:MTR_5g038620 1034.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g1918 2 22889839 22896870 Tpr2g1918 2 22889839 22896870 ECH
Tpr2g1918 2 22889839 22896870 Tpr5g3017 5 53105244 53111407 ECH
Tpr2g1918 2 22889839 22896870 Tpr5g3017 5 53105244 53111407 PCT