Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1912 ATGAAGATATTACAGGCACAGTCCTATACAACCACTACAAACCCATTTTCAATCCCAACTCACTCTTTCATCACTCCCAAATTATCCATTCCTGTAAGGCATGTGGGTCCCACTTTCTCCTCCACTCTCCAACAATTCTCCATCACATGTCGCCGCCCATATCCTTTCCAACCCAAACAATCCCCCCCACCACCATCACCATCTTCTTCAGTTGGAGAATTGCCAGCAAAGATATATGTTGGTCACTCAATTTACAAAGCAAAAGCTGTACTCACTGTGTCTCCTAGACCTCCACAATTCACTACATTGAATTCAGGGTCAGGGGCATTCAAGATATCTAAAGAAGGTTGTGTCATGTTAGAGTTTGCTCCTGCTGCCGGTGCCTATCAATATGATTGGAACAGAAAACAGGTATTTTCGCTATCTGTGGATGAAATCGGAAATCTAATTAGCCTTCGTCCAAGGGAGTCTTGTGAATTTTTTCATGATCTGTTTATTGGAAAAAGTGATGAAGGTAAAGTGAGAAAATTTTTGAAGGTGAAGCCACTTCTCGACCGTTCTGGTCACATGTTTAACATAAGTGTTGAAAACAAGCTCGAGAACATAAACGAAAACATATTAATCCCTGTCACAAAAGCAGAATTTGCAGTTTTCAATTCACTTTTCGATTTTATCATGCCAAGCCTTTTAGGTTGGAATGTCTTTGCCAACACCATAAATCCAGAAGTAAATAATACAAATCAAGGAATAGAAGAAGATTTTGAATGGAACAAATTCAACAGAATAATGTGA 792 0.3939 MKILQAQSYTTTTNPFSIPTHSFITPKLSIPVRHVGPTFSSTLQQFSITCRRPYPFQPKQSPPPPSPSSSVGELPAKIYVGHSIYKAKAVLTVSPRPPQFTTLNSGSGAFKISKEGCVMLEFAPAAGAYQYDWNRKQVFSLSVDEIGNLISLRPRESCEFFHDLFIGKSDEGKVRKFLKVKPLLDRSGHMFNISVENKLENINENILIPVTKAEFAVFNSLFDFIMPSLLGWNVFANTINPEVNNTNQGIEEDFEWNKFNRIM* 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1912 263 Gene3D Transcriptional Coactivator Pc4; Chain A 71 250 IPR009044 GO:0003677|GO:0006355
Tpr2g1912 263 PANTHER SINGLE-STRANDED DNA-BINDING PROTEIN WHY2, MITOCHONDRIAL 57 257 IPR013742 GO:0003697|GO:0006355|GO:0006952
Tpr2g1912 263 PANTHER SINGLE-STRANDED DNA-BINDING PROTEIN WHY1, CHLOROPLASTIC 57 257 - -
Tpr2g1912 263 Pfam Whirly transcription factor 84 220 IPR013742 GO:0003697|GO:0006355|GO:0006952
Tpr2g1912 263 SUPERFAMILY ssDNA-binding transcriptional regulator domain 77 256 IPR009044 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1912 Tpr-Chr2 22843139 22846663 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g1912 6 258 Whirly Transcription Factor Family AT1G14410 52.692 1.27e-88 262
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Whirly Tpr2g1912 Whirly 2.2e-53 CL0609
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1912 - - lang:109355868 267.314
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g1912 2 22843139 22846663 Tpr2g1912 2 22843139 22846663 ECH
Tpr2g1912 2 22843139 22846663 Tpr2g1912 2 22843139 22846663 PCT