Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1906 ATGGTTTTGAGCTGTTTTAAGGTTTTGTTATTGATGGGGTTGTTGGGTGCTGAGAAGGGTAAAGTGGTGGAGTCTTGGGATGTGTGTAAATCTAAGGGGAGGAAGAAGAAAAAGAAGAGTCAAGAGAATGAGGGTGTTGTTGAAGAGAAAAAACCGGGGTGTTGGGTTGGGTTAGGGTTGTTTGGGAGCTGCATTTCTTCAAGATCCAAAGTTGATAGCTCAATCAGCGGCGCAAGTACTCATTATGCTGAAAGTAAATCGACTAATGACACGAGTAGAGGACAACCAACAGCTCCGGTAATATCTTCTACAACCACTAGTATTGCAGAAAGCAATTCCTCCACCTCTAAACTTGAAGAGGAGCTTAAAATTGCTTCTAGGCTGCGAAAGTTCACTTTCAATGAACTTAAGTTGGCAACAAGAAATTTCCGGCCCGAGAGTTTTCTTGGCGAAGGTGGGTTTGGTTGTGTTTTCAAGGGTTGGATTGAAGAAAATGGAACTGCTGCAGTGAAACCAGGCACAGGGCTTACTGTCGCTGTAAAAACTCTTAACCATGATGGGCTTCAGGGTCATAAAGAATGGCTGGCTGAGGTAAATTTTCTTGGCGATCTTGTTCATCAAAACCTTGTTAAACTCGTAGGTTACTGCATTGAAGATGATCAAAGGCTGCTCGTGTATGAGTTCATGGCTCGGGGAAGCCTGGAAAATCACTTATTTAGGAGACCCTTACCTCTTCCATGGTCCATTCGGATGAAAATTGCACTAGGAGCTGCTAAGGGTCTCGCTTTTCTTCACGAAGAAGCTGAACGGCCAGTAATTTATAGGGATTTTAAAACGTCAAATATACTATTAGATGCAGACTACAATGCCAAGCTCTCGGACTTTGGTCTTGCCAAAGATGGTCCTGAAGGTGATAAAACCCACGTGTCCACTCGAGTCATGGGAACCTATGGTTACGCCGCACCTGAATATGTAATGACAGGTCATCTCACATCAAAAAGTGACGTGTACAGTTTCGGAGTCGTACTGCTTGAGATGTTGAGCGGCAGAAGATCTATGGACAAACACCGACCCAACGGCGAGCATAACCTTGTTGAATGGGCTCGACCACATCTAGGAGAACGAAGAAGATTCTACCGGTTATTAGACCCTCGCCTTGAAGGTCACTTTTCCGTAAAAGGAGCTCAGAAAGCTGTTCAACTAGCCGCTCACTGCCTCAGTAGAGACCCAAAAGTCAGACCCTTAATGAGTGAAGTTGTCGAAGCTTTAAAGCCTCTTCCAAACCTTAAAGACATGGCAAGCTCTTCATACTATTTCCAATCAATGCAAGCCGAGCGGTTCAGTGCGAGTCCAAACACTAGAAGTGTACATGCACAAGGAGCATCGCTCGCTCGGAACGGACAACAGCGAAGGACCCTTTCGATACCAAACGGCACTCATGTATCTCCTTATCACCATAAGTATCCCCAACAATCACCTAAACCTAATGGTAAAGCATAA 1500 0.448 MVLSCFKVLLLMGLLGAEKGKVVESWDVCKSKGRKKKKKSQENEGVVEEKKPGCWVGLGLFGSCISSRSKVDSSISGASTHYAESKSTNDTSRGQPTAPVISSTTTSIAESNSSTSKLEEELKIASRLRKFTFNELKLATRNFRPESFLGEGGFGCVFKGWIEENGTAAVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHQNLVKLVGYCIEDDQRLLVYEFMARGSLENHLFRRPLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLSGRRSMDKHRPNGEHNLVEWARPHLGERRRFYRLLDPRLEGHFSVKGAQKAVQLAAHCLSRDPKVRPLMSEVVEALKPLPNLKDMASSSYYFQSMQAERFSASPNTRSVHAQGASLARNGQQRRTLSIPNGTHVSPYHHKYPQQSPKPNGKA* 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1906 499 ProSiteProfiles Protein kinase domain profile. 143 429 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g1906 499 SUPERFAMILY Protein kinase-like (PK-like) 121 423 IPR011009 -
Tpr2g1906 499 ProSitePatterns Protein kinases ATP-binding region signature. 149 181 IPR017441 GO:0005524
Tpr2g1906 499 CDD STKc_IRAK 149 426 - -
Tpr2g1906 499 Pfam Protein tyrosine and serine/threonine kinase 148 423 IPR001245 GO:0004672|GO:0006468
Tpr2g1906 499 Gene3D Transferase(Phosphotransferase) domain 1 229 445 - -
Tpr2g1906 499 ProSitePatterns Serine/Threonine protein kinases active-site signature. 272 284 IPR008271 GO:0004672|GO:0006468
Tpr2g1906 499 PANTHER OS01G0588500 PROTEIN-RELATED 73 489 - -
Tpr2g1906 499 Gene3D Phosphorylase Kinase; domain 1 117 228 - -
Tpr2g1906 499 MobiDBLite consensus disorder prediction 450 479 - -
Tpr2g1906 499 MobiDBLite consensus disorder prediction 450 499 - -
Tpr2g1906 499 MobiDBLite consensus disorder prediction 82 114 - -
Tpr2g1906 499 PANTHER KINASE APK1B, CHLOROPLAST, PUTATIVE-RELATED 73 489 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1906 Tpr-Chr2 22763886 22768257 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g1906 90 423 Glycoside Hydrolase AT3G07070 53.709 3.98e-118 352
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Tpr2g1906 PK_Tyr_Ser-Thr 3e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1906 - - gmx:100787151 851.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g1906 2 22763886 22768257 Tpr2g1906 2 22763886 22768257 ECH