Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tpr2g1891 | ATGGATCATCAGTCCCTCCTCAGATTTGATGTGAGTCCTGCCCGTGAACCAATTCTACAACAACAGTTACAACAAGACATTGACATGCCTTCTTTGTTCTTCGTTGATTTTGAATTCATCAACACAATTTTCCCATGGGATTCTTTTCGTAATCCCAATGAGTACGAGGAAACAAACAATGTAACTCTTACGATTCCTACTGAAATCTTATGTAATTGTACGGATCACGATCATAAAAGTGTTATGTATGACATATTTTCCTTCGTGTCTACCAACATATTAGACACGATTTTACCGGAATTGGAAGAATGTGCTAAACAAATGGTTGAAGAGAATCATGAAGAACGTGAATTTTTGGAGATGGATTTGTTGATTCATATTAGCACAATAGACATGGCAGGTGAAGAAAATCAGAATGATAATGGTCAAGCTCAACAAATTGTGGATTTGTTGGAGAAACATTCAATTGATTATCTTTCTTCCGACTCGACTACAGAACAATGTTCAATTTGTTTGGAGGAGTTTGGGACAAGTTCAGAATCTGTTTCTACAAAATGCTCGCATGTTTTTCATAAAGAGTGCATGGTTCCTTGGATCCAAAGATGCATCGACTGTTCATCTTTTTATTCTTGTCCATTATGTCGAGGTCAAATAATATGA | 660 | 0.3636 | MDHQSLLRFDVSPAREPILQQQLQQDIDMPSLFFVDFEFINTIFPWDSFRNPNEYEETNNVTLTIPTEILCNCTDHDHKSVMYDIFSFVSTNILDTILPELEECAKQMVEENHEEREFLEMDLLIHISTIDMAGEENQNDNGQAQQIVDLLEKHSIDYLSSDSTTEQCSICLEEFGTSSESVSTKCSHVFHKECMVPWIQRCIDCSSFYSCPLCRGQII* | 220 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tpr2g1891 | 219 | PANTHER | RING/U-BOX SUPERFAMILY PROTEIN | 63 | 215 | - | - | |
Tpr2g1891 | 219 | SUPERFAMILY | RING/U-box | 167 | 218 | - | - | |
Tpr2g1891 | 219 | ProSiteProfiles | Zinc finger RING-type profile. | 168 | 215 | IPR001841 | - | |
Tpr2g1891 | 219 | Pfam | Ring finger domain | 167 | 215 | IPR001841 | - | |
Tpr2g1891 | 219 | PANTHER | RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING | 63 | 215 | - | - | |
Tpr2g1891 | 219 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 129 | 219 | IPR013083 | - | |
Tpr2g1891 | 219 | SMART | ring_2 | 168 | 214 | IPR001841 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tpr2g1891 | Tpr-Chr2 | 22514922 | 22515581 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tpr2g1891 | 119 | 218 | C3H Transcription Factor Family | AT1G49850 | 29.000 | 4.69e-11 | 58.9 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tpr2g1891 | - | K11982 | mtr:MTR_5g006240 | 193.741 |