Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1880 ATGTCTCTCTTTCCCTTAACCATTACCCTCTCCTTCCTCATCCTCCTCCTACTCTTCCCTACATCCACTCAAACATGCTCATCAATCAATAACACAACAAAATTACACTCTTGCCCTCCATTCTCATCCACCCCACCATTCCCATTCTCAACCTCCCCAGGCTGTGGCCACCCATCTTTCCAACTAACCTGCTCAACCCCCTACTCTTTCCTCACCATCAACAACCTCACTTTCTCAATCCTCTCTTTCAAACCCAACACTTCCTCAATCCTCCTATCCCCTCACACCACCACCACCACCACTTGTTCTTCAACATCTTCAATCCCAAACAAACCAATCAACCTCTCCAACACACCATTCACACTCTCCGATGAAACATGTTCACGTCTCTCTTTTCTTCAACCTTGTTCCCCACCAACTCACCCAAATTGCAGTCTTTGTCCTTGGCAATGCAAAATCATCAAAAACCCAACTGAAATATTCAATGATTGTAGATCCATGCATCACTCTGTTTCAGATTCTGAACCTAGTTGTCAAAGTGATGTTCTTAGTTACCTCAATGAAATTCTCACTTTAGGTATCGAAGTTCAATGGGACCAAGCTTTAACACAAGACACTTACTTCACAAATTGCAGCAATTGCATCAACAAGAACGGTTTTTGCGGTTTCAATTCTTCAGACCCGAATCAAGACTTCATTTGTTACCAATCAAAATCAACTTTTTCACCACCGTGGATTCGGAAAATGAAACTTAACAAAATCGCGATTTTCGCTATTATTATAGCTTCCACTTCGTTGATTCTGTTTCTCTCAGTTATCATTTCAATTCTCCGGTCAAGAAAGTTAAACACGACGGTGGAAGAAGATCCAACCACCGTATTCCTCCACAACCACCGCAACGCGAATCTATTTCCACCGGTTTTCACCTACGATGAATTAAACATTTCTACCAACAACTTCGATCCGAAGCGAAAAATCGGCGACGGAGGATTCGGCTCTGTTTATCTCGGAAACCTCCGTGACGGAAAAATCGCCGCCGTGAAACATCTTCACCGGCATAATCACACAGCGGCATTCTCATCAAAATCATTCTGCAACGAGATTCTGATTCTCTCATCGATCGATCATCCAAATCTCGTTAAACTTCACGGTTACTGTAGCGATCCACGAGGTTTGATTCTTGTTTATGATTACATCCCTAACGGAACCCTAGCGGAACATCTTCACGGTTCAAAGAGTAAACGGAACGGTTATAAGCTGACGTGGCAAACGCGGCTTGATATTGCAATACAAACGGCGTTAGCGATGGAGTATCTTCATTTCTCAGTTAAACCACCGATAGTTCACAGAGATATAACGTCGTCAAATATTTTTATTGAGAAAGATATGAGAATTAAAGTCGGTGATTTTGGGTTATCGAGGTTGTTAGTTTTGCAAGAAACTACTAATAATCAAACGACGTCGTCTAGTGGTTTTGTTTGGACTGGTCCACAAGGTACACCAGGTTATTTAGACCCGGAATATCATCGCTCTTTTCGATTAACTGAAAAGAGTGACGTGTATAGTTTTGGTGTGGTTTTGCTCGAGTTAATTACAGGGCTTAAAGCAGTTGATTATTGTAGAGATAAACGCGAGATGGCACTTGCTGACATGGTCGTTTCGAGGATTCACACGGGTCAATTGAAAGAGGTACTGGACCCGGTACTTGATTTGAGTAACGACGGTGAAATGCTTAATGCGGTGGCTGCTGTGGCGGAGCTGGCTTTTCGATGTGTTGCATCGGATACAGATGATCGACCCGATTCAAAGGAGGTTGTGGAGGAGTTGAAACGGGTTCGGTTACGAACGTCAATGAATGGTGACGTGGCGAAGGATGAATGA 1881 0.4317 MSLFPLTITLSFLILLLLFPTSTQTCSSINNTTKLHSCPPFSSTPPFPFSTSPGCGHPSFQLTCSTPYSFLTINNLTFSILSFKPNTSSILLSPHTTTTTTCSSTSSIPNKPINLSNTPFTLSDETCSRLSFLQPCSPPTHPNCSLCPWQCKIIKNPTEIFNDCRSMHHSVSDSEPSCQSDVLSYLNEILTLGIEVQWDQALTQDTYFTNCSNCINKNGFCGFNSSDPNQDFICYQSKSTFSPPWIRKMKLNKIAIFAIIIASTSLILFLSVIISILRSRKLNTTVEEDPTTVFLHNHRNANLFPPVFTYDELNISTNNFDPKRKIGDGGFGSVYLGNLRDGKIAAVKHLHRHNHTAAFSSKSFCNEILILSSIDHPNLVKLHGYCSDPRGLILVYDYIPNGTLAEHLHGSKSKRNGYKLTWQTRLDIAIQTALAMEYLHFSVKPPIVHRDITSSNIFIEKDMRIKVGDFGLSRLLVLQETTNNQTTSSSGFVWTGPQGTPGYLDPEYHRSFRLTEKSDVYSFGVVLLELITGLKAVDYCRDKREMALADMVVSRIHTGQLKEVLDPVLDLSNDGEMLNAVAAVAELAFRCVASDTDDRPDSKEVVEELKRVRLRTSMNGDVAKDE* 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1880 626 Gene3D Transferase(Phosphotransferase) domain 1 399 625 - -
Tpr2g1880 626 ProSitePatterns Tyrosine protein kinases specific active-site signature. 447 459 IPR008266 GO:0004672|GO:0006468
Tpr2g1880 626 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 27 618 IPR045274 GO:0007166
Tpr2g1880 626 CDD STKc_IRAK 326 611 - -
Tpr2g1880 626 ProSitePatterns Protein kinases ATP-binding region signature. 326 348 IPR017441 GO:0005524
Tpr2g1880 626 ProSiteProfiles Protein kinase domain profile. 320 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g1880 626 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.5 27 618 - -
Tpr2g1880 626 Gene3D Phosphorylase Kinase; domain 1 296 398 - -
Tpr2g1880 626 SUPERFAMILY Protein kinase-like (PK-like) 302 609 IPR011009 -
Tpr2g1880 626 Pfam Protein tyrosine and serine/threonine kinase 323 609 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1880 Tpr-Chr2 22384362 22387323 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g1880 13 625 Receptor kinase-like Gene Family AT1G69910 59.091 0.0 717
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Tpr2g1880 PK_Tyr_Ser-Thr 1e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1880 - - cam:101489033 972.615
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g1880 2 22384362 22387323 Tpr2g1880 2 22384362 22387323 ECH