Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1878 ATGGCTACAAATGACTTGAAGCTTTTGAGTACACCTTCTAGTCCATTTGCATTGAGAGTAAAAATTGCCCTTAACATCAAAGGATTGGATTATGACAACATTGTAGAAACCATGAATCCTAAAAGTGACTTGCTTCTTCAATCCAACCCCGTTTACAAAAAAATTCCAGTTCTAATTCATGGTGATAAACCCATTTCTGAATCTGCAATCATAGTTGAATACATTGATGAAGTTTGGAAAAATAATGGTACTCCTATCCTTCCTTCAAATGCTTATGATTGCGCCATTGCGCGATTTTGGGTTGCCTACATCGATGACAAGTGGTATAATTCCTCAAGAAATCATTTGGTTGCTCAAAATGAGGAGTCAAAAAAGGCAAATTTTGATCAAATGGAAGAAGTGCTTTTGAGGTTAGAAGATGTGCTCAACAAGTACAGTGAAGGAAAGGAGTTTTTTGGAGGAGACAAGATTGGATTTCTTGATATTGGTTTTGGAAGCTATTTAAGTTGGTTAAGGGTCACAGAAAAAATGATAGGAAAAAAAGTGCTTGATGAAACAAAGACTCCTGCATTGGTGAAATGGGCTGAAGCTTTTGTTGCTCATCCTGCTGTTAAGGGAAATCTACCAGAAATTGATAAACTTTTGGAGTTTGCTAAGGGTTTGGTGCAAAGAATGGCTGCTGCTGCTTGTCCTAAGTAG 699 0.3734 MATNDLKLLSTPSSPFALRVKIALNIKGLDYDNIVETMNPKSDLLLQSNPVYKKIPVLIHGDKPISESAIIVEYIDEVWKNNGTPILPSNAYDCAIARFWVAYIDDKWYNSSRNHLVAQNEESKKANFDQMEEVLLRLEDVLNKYSEGKEFFGGDKIGFLDIGFGSYLSWLRVTEKMIGKKVLDETKTPALVKWAEAFVAHPAVKGNLPEIDKLLEFAKGLVQRMAAAACPK* 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1878 232 Gene3D Glutaredoxin 1 86 - -
Tpr2g1878 232 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 5 220 IPR045073 -
Tpr2g1878 232 SFLD Glutathione Transferase (cytosolic) 2 228 IPR040079 -
Tpr2g1878 232 SUPERFAMILY Thioredoxin-like 5 109 IPR036249 -
Tpr2g1878 232 Pfam Glutathione S-transferase, N-terminal domain 6 77 IPR004045 -
Tpr2g1878 232 SFLD Main.3: Omega- and Tau-like 2 228 IPR045073 -
Tpr2g1878 232 PANTHER GLUTATHIONE S-TRANSFERASE U17 5 220 - -
Tpr2g1878 232 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 221 IPR010987 -
Tpr2g1878 232 CDD GST_N_Tau 6 79 - -
Tpr2g1878 232 CDD GST_C_Tau 91 221 IPR045074 GO:0004364|GO:0006749
Tpr2g1878 232 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 4 83 IPR004045 -
Tpr2g1878 232 Pfam Glutathione S-transferase, C-terminal domain 92 202 IPR004046 -
Tpr2g1878 232 Gene3D - 87 230 - -
Tpr2g1878 232 SUPERFAMILY GST C-terminal domain-like 77 224 IPR036282 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1878 Tpr-Chr2 22374736 22376731 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g1878 1 227 Glutathione S-transferase Gene Family AT1G10360 55.507 9.63e-86 252
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1878 K00799 - gmx:100808374 299.671
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g1878 2 22374736 22376731 Tpr2g1878 2 22374736 22376731 ECH
Tpr2g1878 2 22374736 22376731 Tpr2g1878 2 22374736 22376731 PCT
Tpr2g1878 2 22374736 22376731 Tpr2g1877 2 22362248 22363638 PCT