Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1877 ATGGCTACAAATGACTTGAAGCTTTTGGGTGGTTGGTTCAGTCCATTTGCTTGTAGGGTACAAATTGCTCTTAGCATCAAAGGTTTGGATTATGAGAACATTGTAGAAAATTTGAACCCCAAAAGTGATTTGCTTCTTCAATCCAACCCCACATACAAAAAAATCCCAGTTCTCATTCATGGAGAAAAAACCATTTGTGAGTCTGCAATCATAGTTCAATATATTGATGAAGTTTGGAAAAATAATGGTACTTCTTCAATCCTTCCTTCAAATGCTTATGACAAAGCCATTGCTAGATTTTGGGTTTCTTACATTGATGACAAGTTCTTTAATTCCTTGAGATTTGGCTTATTTGCTCAAGATGATGAGTCAAAGAAGAAATATTTTGAGGAACTAGAAGAAGTGCTTTTGAAGTTGGAAGAAGTGTTCAACGAGTTGAGTGAAGGAAAGGAGTTTTTTGGAGGAGAAAATATTGGATTTATTGATGTTGCTTTTGGATGCTATTTGAGTTGGTTAAGGGTCAAAGAGAAATTCACAGGAACTAAAAAGTTTGATGAAGCTAAGAATCCTGGTTTGGTGAAATGGGCTGAGGCTTTTTCAGCTCATCCAGCTGTGAAAGGAATTTTACCAGAAACTGATAAGCTTGTTGAGTATGCCATAGCTCTGGCACAAAGATTGGCTGCTGCTGCTGCTGCCGACGCCGCTCCTCCTAAGTAA 717 0.3794 MATNDLKLLGGWFSPFACRVQIALSIKGLDYENIVENLNPKSDLLLQSNPTYKKIPVLIHGEKTICESAIIVQYIDEVWKNNGTSSILPSNAYDKAIARFWVSYIDDKFFNSLRFGLFAQDDESKKKYFEELEEVLLKLEEVFNELSEGKEFFGGENIGFIDVAFGCYLSWLRVKEKFTGTKKFDEAKNPGLVKWAEAFSAHPAVKGILPETDKLVEYAIALAQRLAAAAAADAAPPK* 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1877 238 Pfam Glutathione S-transferase, N-terminal domain 6 77 IPR004045 -
Tpr2g1877 238 Gene3D Glutaredoxin 1 87 - -
Tpr2g1877 238 Pfam Glutathione S-transferase, C-terminal domain 94 203 IPR004046 -
Tpr2g1877 238 SUPERFAMILY GST C-terminal domain-like 77 225 IPR036282 -
Tpr2g1877 238 Gene3D - 88 231 - -
Tpr2g1877 238 Coils Coil 125 149 - -
Tpr2g1877 238 CDD GST_C_Tau 92 218 IPR045074 GO:0004364|GO:0006749
Tpr2g1877 238 PANTHER GLUTATHIONE S-TRANSFERASE U17 5 220 - -
Tpr2g1877 238 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 91 222 IPR010987 -
Tpr2g1877 238 CDD GST_N_Tau 6 79 - -
Tpr2g1877 238 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 4 83 IPR004045 -
Tpr2g1877 238 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 5 220 IPR045073 -
Tpr2g1877 238 SUPERFAMILY Thioredoxin-like 5 110 IPR036249 -
Tpr2g1877 238 SFLD Main (cytGST) 2 230 - -
Tpr2g1877 238 SFLD Main.3: Omega- and Tau-like 2 230 IPR045073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1877 Tpr-Chr2 22362248 22363638 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g1877 1 222 Glutathione S-transferase Gene Family AT1G10360 53.153 8.92e-80 237
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1877 K00799 - gmx:547576 296.589
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g1878 2 22374736 22376731 Tpr2g1877 2 22362248 22363638 PCT