Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1854 ATGATGGATCTTAATGATGCTATGCAATTTGTGTACAAGGTGAAGAGTCGATTTCAGCTTACTCGTGATCGTCATTTTTATGCACGGTTTCTAGACATATTTATAAAGTATAGAAATGGAGAAAATACTGCTGCTGATGTCTATCGAGAGGTTACTTTAATTTTGGAAGGCCATGATGATCTCATTGATGAGTTAAGAATGTTTTTGCCGTACACGGCTAACGTTGTATGA 231 0.3636 MMDLNDAMQFVYKVKSRFQLTRDRHFYARFLDIFIKYRNGENTAADVYREVTLILEGHDDLIDELRMFLPYTANVV* 77
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1854 76 Pfam Paired amphipathic helix repeat 27 69 IPR003822 GO:0006355
Tpr2g1854 76 PANTHER SIN3B-RELATED 3 73 IPR039774 GO:0003714
Tpr2g1854 76 SUPERFAMILY PAH2 domain 3 71 IPR036600 GO:0006355
Tpr2g1854 76 ProSiteProfiles PAH domain profile. 1 72 IPR003822 GO:0006355
Tpr2g1854 76 PANTHER SIN3A, ISOFORM G 3 73 - -
Tpr2g1854 76 Gene3D Paired amphipathic helix 6 70 IPR036600 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1854 Tpr-Chr2 22033097 22034626 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Tpr2g1854 PAH 1.1e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1854 - K11644 brp:103868339 66.6254