Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1851 ATGGAGAACCGACGTTCTATGGAACATTGTAGAAAAGATGCTTTAGAATTACTCCTAGAAATACAGAATAGATTTATTCAACAAAATAAGAGGGATAAGTTTGATGAATTTATCAGATTCTACATGGCTTATCATAAGGAAAAAAGGACTGATGGTGTGGATTATACAGAAAGATTTAAGGAAATATTTAAAGATAATAGAGATTTGCTATTGAGATTAAACAACTTCTTGCCAATTGGATGTGAAATCAAACTTCCATCGGAGGGTGAACAATCTTGCCCAAAGAAGCATGTAAAAATGGAAGATGCTATAAATTTTTTAAAGAAGATAAAGGCTCGGTTTCATGGCGTAGACGATGTTCACATTTACTATTCATTACTTAACGTATTAAATATGTACTATAAGAAACAACAGTCTTTCACCGACGTCTGCCAAGAGGTTGCTTTTATTTTCAAAGGTTATTCCGACATTCTTGATGAATTTACTCATTTTCTCCCGGAAGCTTATTCTAATTATTTTGCTACTCAAAATTCTGATTTCGCTCTAATTCGTGAATTCGAGATTCTTGATTTCGATCGATTGGTGAGAACGTTGGAACCATGA 603 0.3333 MENRRSMEHCRKDALELLLEIQNRFIQQNKRDKFDEFIRFYMAYHKEKRTDGVDYTERFKEIFKDNRDLLLRLNNFLPIGCEIKLPSEGEQSCPKKHVKMEDAINFLKKIKARFHGVDDVHIYYSLLNVLNMYYKKQQSFTDVCQEVAFIFKGYSDILDEFTHFLPEAYSNYFATQNSDFALIREFEILDFDRLVRTLEP* 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1851 200 PANTHER BNAA07G28530D PROTEIN 7 167 - -
Tpr2g1851 200 PANTHER SIN3B-RELATED 7 167 IPR039774 GO:0003714
Tpr2g1851 200 SUPERFAMILY PAH2 domain 12 78 IPR036600 GO:0006355
Tpr2g1851 200 ProSiteProfiles PAH domain profile. 3 80 IPR003822 GO:0006355
Tpr2g1851 200 Gene3D Paired amphipathic helix 13 78 IPR036600 GO:0006355
Tpr2g1851 200 Pfam Paired amphipathic helix repeat 121 165 IPR003822 GO:0006355
Tpr2g1851 200 ProSiteProfiles PAH domain profile. 96 168 IPR003822 GO:0006355
Tpr2g1851 200 Gene3D Paired amphipathic helix 93 168 IPR036600 GO:0006355
Tpr2g1851 200 SUPERFAMILY PAH2 domain 95 166 IPR036600 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1851 Tpr-Chr2 21995142 22004347 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Tpr2g1851 PAH 1.1e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1851 K11644 - gmx:100817626 149.058