Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1844 ATGAAGAAAATATTAGAAGATGATAAAGATTTGATATTGAAATTAAACAGACTCGTGCCAGATCGATACAAAATTAATGATATAACTAGTCCAAAGAAACGTCCTAATTTGGAAGATGCTAAAATTTTTTTGAGAAAGATAAGGGCTCAATTTCAAGGGGTTGATGATCACATTTACAAATCATTGATTTTCATACTGAATATGTTTTATAGGAAAGTTAAGTCTTTCAATGAGGTTCACCAAGAGGTTACTACACTTCTTAAAGACCACCCTGATCTTCTTGATGAATTTACTCATTTTCTTCCAGAGGGTATTGCTTCACAAAAGATTCTATGCGTCGAGGCAAATTCAGGTTGA 357 0.3249 MKKILEDDKDLILKLNRLVPDRYKINDITSPKKRPNLEDAKIFLRKIRAQFQGVDDHIYKSLIFILNMFYRKVKSFNEVHQEVTTLLKDHPDLLDEFTHFLPEGIASQKILCVEANSG* 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1844 118 ProSiteProfiles PAH domain profile. 33 104 IPR003822 GO:0006355
Tpr2g1844 118 SUPERFAMILY PAH2 domain 30 103 IPR036600 GO:0006355
Tpr2g1844 118 Pfam Paired amphipathic helix repeat 57 101 IPR003822 GO:0006355
Tpr2g1844 118 Gene3D Paired amphipathic helix 29 104 IPR036600 GO:0006355
Tpr2g1844 118 PANTHER SIN3B-RELATED 1 103 IPR039774 GO:0003714
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1844 Tpr-Chr2 21926087 21927109 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Tpr2g1844 PAH 8e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1844 K11644 - gmx:100817626 101.679