Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tpr2g1844 | ATGAAGAAAATATTAGAAGATGATAAAGATTTGATATTGAAATTAAACAGACTCGTGCCAGATCGATACAAAATTAATGATATAACTAGTCCAAAGAAACGTCCTAATTTGGAAGATGCTAAAATTTTTTTGAGAAAGATAAGGGCTCAATTTCAAGGGGTTGATGATCACATTTACAAATCATTGATTTTCATACTGAATATGTTTTATAGGAAAGTTAAGTCTTTCAATGAGGTTCACCAAGAGGTTACTACACTTCTTAAAGACCACCCTGATCTTCTTGATGAATTTACTCATTTTCTTCCAGAGGGTATTGCTTCACAAAAGATTCTATGCGTCGAGGCAAATTCAGGTTGA | 357 | 0.3249 | MKKILEDDKDLILKLNRLVPDRYKINDITSPKKRPNLEDAKIFLRKIRAQFQGVDDHIYKSLIFILNMFYRKVKSFNEVHQEVTTLLKDHPDLLDEFTHFLPEGIASQKILCVEANSG* | 119 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tpr2g1844 | 118 | ProSiteProfiles | PAH domain profile. | 33 | 104 | IPR003822 | GO:0006355 | |
Tpr2g1844 | 118 | SUPERFAMILY | PAH2 domain | 30 | 103 | IPR036600 | GO:0006355 | |
Tpr2g1844 | 118 | Pfam | Paired amphipathic helix repeat | 57 | 101 | IPR003822 | GO:0006355 | |
Tpr2g1844 | 118 | Gene3D | Paired amphipathic helix | 29 | 104 | IPR036600 | GO:0006355 | |
Tpr2g1844 | 118 | PANTHER | SIN3B-RELATED | 1 | 103 | IPR039774 | GO:0003714 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tpr2g1844 | Tpr-Chr2 | 21926087 | 21927109 | Tandem |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | Others | Tpr2g1844 | PAH | 8e-11 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tpr2g1844 | K11644 | - | gmx:100817626 | 101.679 |