Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1819 ATGCCAACCCTTGTTCAATTCTTGATATCAGTTTTGATACAGTTGCTTTTTGTGCAAGTTTCATCCCAAGTTAACCAGTTCTTGTATGCAGGATTCAAGGATATTGGTCCCAACAATCTAACCTTGGATGGATTTGCAAAGATAGAGAAAAATGGGATAATAAGATTAACAAATCATACAAACAATATAACAGGTCATGCTTTTTATCCATTACCTTTTCAGCTAAAGAACTCAACAACTGGTAACGCTTTCTCTTTTTCTTCATCTTTTGTTCTTGCTGTTGTCCCTCAATATCCTAACATAGGTGGTCATGGCATGGCTTTCACAATAGCAACTACTAAGGATCTTAAAGGTTTACCTATTCAATATCTTGGTCTATTCAATTCAAGTAATGTTGGTAATTTCTCTAACCATATTTTTGCTGTTGAGTTTGACACTGTCCAAGACTTTGGATTTGATGATATCAATGATAACCATGTTGGAATAGACATCGATGGTTTGAAATCCAATGCATCTGTTATTACTAGCTATTACACTGACAATGATGATTCCACCAAACAATATTTTAATATCAAAAGTGGTAAACCAATTCTAGCTTGGGTTGATTATGATTCTTCATTGAATCTTGTTAGTGTTACACTTTCTTCAACTTCAAGCAAACCCAAAAAACCAACTTTGTCATTTCATGTGGATTTATCACATGTTTTTCATGATACTATGTATGTTGGATTCTCTGCATCAACTGGTTTGCAGCTTGCTAGCTCTCATTACATCTTGGGATGGAGTTTTAGAATCAATGGACAAGCACCGTCACTTGATTTGTCTTCACTTCCACAACTTCCACAACCAAAGAAGAAGAAAACTTCTATGATAACTGGTGTTTCGGTCACGGTTTCGGTTGTTGTATTGTGTTCTATAACAATTGGTATTTACATTTTCAGAAAAATCAAGAATGCTGATGTAATAGAATCGTGGGAGCTTGAAGTTGGGCCACATAGATACTCCTATCAAGAGCTCAACAAAGCTACAAAAGGTTTCAAGGAGAAAGAGTTACTTGGGCAAGGTGGTTTCGGCAGAGTTTACAAGGGGACATTACCAAATTCAGATATTCAAGTAGCTGTTAAGAGAGTTTCACATGAATCAAATCAAGGGCTAAGAGAATTTGTCTCCGAAATCGCTAGCATAGGCCGGCTTCGCCATAGGAATTTGGTTCAGTTACTCGGATGGTGTCGCCGCAAAGGCGACCTCTTACTTGTGTATGACTTCATGGCTAATGGAAGCTTAGATAAGTACTTATTTGAAAAGACAGAAATTGTGTTAACTTGGGAACAAAGGTTTAAGATAATAAAGGGTGTTGCTTCAGCTCTTTTGTATCTACATGAAGGCTATGAGCAAGTGGTAATACATAGAGATGTTAAGGCTAGCAATGTTCTTTTAGATTTTGAACTTAATGGAAGATTAGGTGATTTTGGTTTGGCAAGGTTATGTGAACATGGTGATAATCCAGGTACCACTAGAGTGGTAGGAACCTTAGGCTATTTGGCACCAGAGTTACTTAGAACAGGAAAAGCATCTACAAGTTCTGATGTTTTTGCATTTGGTGCATTTCTTCTTGAGGTTGCTTGTGGGAGAAGGCCTATTGAGCCTAAGGCATTACAAGAAGAGTTAGTGTTAGTGGATTGGGTGTGGGAAAGGTACAAAGAAGGAAGAATACTTGAAGTAGTGGATCCTAAATTGAATGAAATTTTTGATGAAAGTGAGGTAGTGATGGTGTTGAAATTGGGATTGATATGTTCAAATGATGTTCCTATTGTAAGGCCTAGTATGAGGCATGTAATGAGGATTTTGGATGGAGAAGTTGAGTTGCTTGATGACTTGAGAAAGCCAGGAGCTATTGATCCACAAGAAGGGTTTGATGAATTTTTGAACTCTCTTACATATTCATCAATTGATATCTTAAGTTCAAGCTCTTATCTTGAAAATAGATACACTAATACTTGTTATGCCTCATTCGAAAATTCACCTCAATCACTTCTCAATACTAGAGAATAA 2052 0.3679 MPTLVQFLISVLIQLLFVQVSSQVNQFLYAGFKDIGPNNLTLDGFAKIEKNGIIRLTNHTNNITGHAFYPLPFQLKNSTTGNAFSFSSSFVLAVVPQYPNIGGHGMAFTIATTKDLKGLPIQYLGLFNSSNVGNFSNHIFAVEFDTVQDFGFDDINDNHVGIDIDGLKSNASVITSYYTDNDDSTKQYFNIKSGKPILAWVDYDSSLNLVSVTLSSTSSKPKKPTLSFHVDLSHVFHDTMYVGFSASTGLQLASSHYILGWSFRINGQAPSLDLSSLPQLPQPKKKKTSMITGVSVTVSVVVLCSITIGIYIFRKIKNADVIESWELEVGPHRYSYQELNKATKGFKEKELLGQGGFGRVYKGTLPNSDIQVAVKRVSHESNQGLREFVSEIASIGRLRHRNLVQLLGWCRRKGDLLLVYDFMANGSLDKYLFEKTEIVLTWEQRFKIIKGVASALLYLHEGYEQVVIHRDVKASNVLLDFELNGRLGDFGLARLCEHGDNPGTTRVVGTLGYLAPELLRTGKASTSSDVFAFGAFLLEVACGRRPIEPKALQEELVLVDWVWERYKEGRILEVVDPKLNEIFDESEVVMVLKLGLICSNDVPIVRPSMRHVMRILDGEVELLDDLRKPGAIDPQEGFDEFLNSLTYSSIDILSSSSYLENRYTNTCYASFENSPQSLLNTRE* 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1819 683 CDD STKc_IRAK 352 618 - -
Tpr2g1819 683 SUPERFAMILY Protein kinase-like (PK-like) 328 629 IPR011009 -
Tpr2g1819 683 Gene3D Phosphorylase Kinase; domain 1 331 422 - -
Tpr2g1819 683 Pfam Legume lectin domain 26 277 IPR001220 GO:0030246
Tpr2g1819 683 Gene3D - 23 275 - -
Tpr2g1819 683 SMART serkin_6 346 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g1819 683 CDD lectin_legume_LecRK_Arcelin_ConA 26 267 IPR001220 GO:0030246
Tpr2g1819 683 ProSitePatterns Serine/Threonine protein kinases active-site signature. 467 479 IPR008271 GO:0004672|GO:0006468
Tpr2g1819 683 PANTHER - 8 649 - -
Tpr2g1819 683 Gene3D Transferase(Phosphotransferase) domain 1 423 628 - -
Tpr2g1819 683 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE S.4 8 649 - -
Tpr2g1819 683 Pfam Protein kinase domain 346 550 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g1819 683 SUPERFAMILY Concanavalin A-like lectins/glucanases 26 286 IPR013320 -
Tpr2g1819 683 ProSiteProfiles Protein kinase domain profile. 346 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g1819 683 ProSitePatterns Protein kinases ATP-binding region signature. 352 375 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1819 Tpr-Chr2 21573763 21576288 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g1819 20 649 Receptor kinase-like Gene Family AT3G55550 58.552 0.0 741
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Tpr2g1819 Pkinase 1.4e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1819 - - gmx:100784346 971.459