Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1813 ATGACGTCGGTTACTAGAACTTGGCAAGCAGCTGGACTGTCATCTGTCTTGGGCTCCGCAGCTTGTCAGCAAGGTAGTGCAGCAGATAGAGTGTTTGCCTTATGTCGGAATGAGGATTACGCTACTATAGGTAGAGTGGCTACGTTGTTATGGAGTATATGGCATAACCGGAATGATAAAATTTGGAATGATAATTTTAGAAGCCCAAACCAAATTGGTCGGGCTGCGTTTGATCATTGGAACAAGTGGTTTGCAGTCCATAAGTTGCGAAGTAACGATGATCATGATGTTCCGCTTGTCAGCACCAATCGGTGGGAAAAACCTCGTATAGGATGGTTAAAGTGCAATGTAGATGCAGCATTTTTTGTCGGTGCAGGTAGGACTGCGATGGGTGCCTGTTTTCGTAATAATTCTGGTGAGTTTATGGCTGGAATTACACAGTGGCAACAACTAACTTTATCAACGGAAGAGGGTGAAGCATGGACATTATTGCAAGCTATGAATGAAGCTAGGAGTAGAGGTTTTGAAAACGTCCAATTTGAAAGTGACTCTCAAGTGTTGGTTTATGCTATTCGTACCAAACGATCAGCTGACATATGGTCTTTTGGAATAACGGCATTGGAGCTTGCCCATGGCCATGCTCCTTTCTCAAAGAAGCCACCGTCGAAGGTACTGCGTACGACTTTCCAAAGTGATGGCAAATTCTCTAAGGTCAGCTAA 720 0.4417 MTSVTRTWQAAGLSSVLGSAACQQGSAADRVFALCRNEDYATIGRVATLLWSIWHNRNDKIWNDNFRSPNQIGRAAFDHWNKWFAVHKLRSNDDHDVPLVSTNRWEKPRIGWLKCNVDAAFFVGAGRTAMGACFRNNSGEFMAGITQWQQLTLSTEEGEAWTLLQAMNEARSRGFENVQFESDSQVLVYAIRTKRSADIWSFGITALELAHGHAPFSKKPPSKVLRTTFQSDGKFSKVS* 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1813 239 CDD RNase_H_like 115 194 IPR044730 -
Tpr2g1813 239 Pfam Reverse transcriptase-like 116 196 IPR002156 GO:0003676|GO:0004523
Tpr2g1813 239 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 22 - -
Tpr2g1813 239 PANTHER BNAC02G40300D PROTEIN 100 207 - -
Tpr2g1813 239 Gene3D - 111 221 IPR036397 GO:0003676
Tpr2g1813 239 SUPERFAMILY Protein kinase-like (PK-like) 194 232 IPR011009 -
Tpr2g1813 239 SUPERFAMILY Ribonuclease H-like 111 195 IPR012337 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1813 Tpr-Chr2 21493046 21497475 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g1813 197 237 MAP Kinase Kinase Kinase Kinase AT4G10730 68.000 1.84e-13 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1813 - - mtr:MTR_4g098780 102.064