Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1807 ATGCCGGGACGTCGGTCGAAGTCGGAGAAGAGTGATGACGGCGAGAAACAGCTCCGGCGAGACCCGTATGAAGTCCTCGGCGTTTCTCGTAACTCAACTGATCAAGAAATTAAATCTGCTTATCGGAAAATGGCTCTTAAGTTTCATCCAGACAAGAATGCTAATGATCCTAAAGCAGCTGATATGTTCAAAGAGGCTACCTTTTCTTACAATATCTTGTCGGATCCAGACAAACGGCGTCAGTATGACTCATCTGGCTTTGAGGCCGTTGAATCAGATAGCCAAGAGTTAGAGTTGGATCTTTCAAGTTTGGGTGCTGTCAATACAATGTTTGCAGCACTTTTTAGCAAACTTGGTGTACCGATTAAGACAACTGTATCTGCGACTGTCTTGGAAGAGGCACTCAATGGATTAGTTTCAATTCGTCCTCTTGCATTGGGACAATTCATATCTAGAAGGGTTGAGAAGCAATGTGCACATTTTTATTCAGTTACAATAACAGAAGAGGAAGCAAGAGCTGGATTTGTTTGTCGAGTCCAATCATCAGACAAAAGCAAGTTCAAGTTACTATATTTCGACCAGGAAGACAATGGTGGCTTAAGTCTTGCACTCCAGGAAGACAGTGCCAAAAATGGGAAGGTTACATCTGCTGGAATGTATTTTCTTGGGTTTCCTGTTTATCGGTTGGATCAAACAATGAACTCAATAGCTGCTGCTAAGGATCCAGATACATCATTTTTCAAAAAACTTGATGGGTTCCAGCCCTGTGAATTAACTGAATTGAAGGCTGGTACCCATACATTTGCAGTTTATGGTGACAATTTTTTCAAAAGTGCAAACTATACAATAGAAGTCTTGTGTGCTGCCCCTTTTAGTGAAGAAAAAGAAAATTTAAGAAACGTCGAAGCTCAAATTTTGTCTAAAAGAGCTGAAATATCAAAGTTTGAATCAGAGTATCGAGAGGTTCTTGCACAATTCACTGAAATGACAAGCAGATATGCACATGAAATGCAAACAATTGACGAGCTATTGAAACAAAGAAATGAAATACATGCTACGTACACAGTTGTTCCTTTAAAGCGAAGTAATAGCAGCAAGGGCAGAAGTAAACCATCTTCAAAAGAGTCAAAAGAAGACGGCGAAGCAAGAGAAAAGAGGAGTACAAGAGAACGACCAAGGAAGAAAAAATGGTATAACCTCCACTTAAGAGTTGACAAGAGAAAGGCTTGCTAA 1233 0.4031 MPGRRSKSEKSDDGEKQLRRDPYEVLGVSRNSTDQEIKSAYRKMALKFHPDKNANDPKAADMFKEATFSYNILSDPDKRRQYDSSGFEAVESDSQELELDLSSLGAVNTMFAALFSKLGVPIKTTVSATVLEEALNGLVSIRPLALGQFISRRVEKQCAHFYSVTITEEEARAGFVCRVQSSDKSKFKLLYFDQEDNGGLSLALQEDSAKNGKVTSAGMYFLGFPVYRLDQTMNSIAAAKDPDTSFFKKLDGFQPCELTELKAGTHTFAVYGDNFFKSANYTIEVLCAAPFSEEKENLRNVEAQILSKRAEISKFESEYREVLAQFTEMTSRYAHEMQTIDELLKQRNEIHATYTVVPLKRSNSSKGRSKPSSKESKEDGEAREKRSTRERPRKKKWYNLHLRVDKRKAC* 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1807 410 SMART dnaj_3 20 78 IPR001623 -
Tpr2g1807 410 SUPERFAMILY Chaperone J-domain 20 90 IPR036869 -
Tpr2g1807 410 ProSitePatterns Nt-dnaJ domain signature. 63 82 IPR018253 -
Tpr2g1807 410 CDD DnaJ 21 75 IPR001623 -
Tpr2g1807 410 MobiDBLite consensus disorder prediction 1 23 - -
Tpr2g1807 410 MobiDBLite consensus disorder prediction 368 388 - -
Tpr2g1807 410 Gene3D DnaJ domain 5 104 IPR036869 -
Tpr2g1807 410 PRINTS DnaJ domain signature 23 41 IPR001623 -
Tpr2g1807 410 PRINTS DnaJ domain signature 41 56 IPR001623 -
Tpr2g1807 410 PRINTS DnaJ domain signature 58 78 IPR001623 -
Tpr2g1807 410 PRINTS DnaJ domain signature 78 97 IPR001623 -
Tpr2g1807 410 Pfam DnaJ domain 21 83 IPR001623 -
Tpr2g1807 410 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN) 1 409 - -
Tpr2g1807 410 MobiDBLite consensus disorder prediction 357 398 - -
Tpr2g1807 410 PANTHER DNAJ DOMAIN-CONTAINING PROTEIN-RELATED 1 409 - -
Tpr2g1807 410 Coils Coil 291 318 - -
Tpr2g1807 410 ProSiteProfiles dnaJ domain profile. 21 86 IPR001623 -
Tpr2g1807 410 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1807 Tpr-Chr2 21369633 21375210 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g1807 19 84 C2H2 Transcription Factor Family AT1G74250 43.662 6.24e-11 62.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g1807 2 21369633 21375210 Tpr2g1807 2 21369633 21375210 ECH