Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1805 ATGGCATCCAAATCCTCTAGCAATATCACTTCACAAGATCAAGGTGATTCTTCCCACACTAAAAATGTGTGGAACAAGAAGGAGAATGAGCAAGATCAATCCTCAAACTCTAATTCCAATAAGTCAATTGATTTCGTCAAGCTATCGAAAGAGGATTCGGTTTTCAGGTCGAAGGTGCATGAGTATGAATTTTTTAGCCCTATTCAAGTTGGTTCATCATCTTGTCCCGCTAACAACAACGAAGGGGAAAATGAGAACAATGAGAAGAATTCAGAGTCAAAGTCTTTTTCATGTCACTTTTGCAAGAGACAATTTTCTACTTTACAAGCGTTAGGAGGACATCAAAATGCTCATAAGGCAGAACGTGCATTAGAAAAGCAACGGAGACAAAAGTATGATGATGGTGCTTCAAGTTTAGGGCAACCTCGCTTTAACCCTTATTTTAGTTATCCTAGTACTCTTTTTCCACCTTATAATTATAGGGCACTTGGGGTTAGAATGGAGTCGATGATTCGAAAACCAGCTTATTTTAACCCTAAGGTTATCCACAATAGTTTTGGGTATGGTCATAATGCTATATGTTTGCAAGAGACATTACACCCTTCTCTTGTTAGCATGAAAAATAATATTAAGGGTGGTAATAGTAGGGCTGGAATTCTAAGTATTAATGGTGGTGCAACTACATCAAGGATTGAAGATGGTGCAAATAATAAAATTGGTGCTATTCTAAAATTTGGAGATTCTTCTACAAGTTCAAACTCAAACATAGACAAGAATGATATTCAACAATCAAAGTTCAACATTGAAGAACAACCCTCCAATTGTGAATCTTCTGAGCTTGATTTGTCCCTTAAGCTTTAA 861 0.367 MASKSSSNITSQDQGDSSHTKNVWNKKENEQDQSSNSNSNKSIDFVKLSKEDSVFRSKVHEYEFFSPIQVGSSSCPANNNEGENENNEKNSESKSFSCHFCKRQFSTLQALGGHQNAHKAERALEKQRRQKYDDGASSLGQPRFNPYFSYPSTLFPPYNYRALGVRMESMIRKPAYFNPKVIHNSFGYGHNAICLQETLHPSLVSMKNNIKGGNSRAGILSINGGATTSRIEDGANNKIGAILKFGDSSTSSNSNIDKNDIQQSKFNIEEQPSNCESSELDLSLKL* 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1805 286 MobiDBLite consensus disorder prediction 1 19 - -
Tpr2g1805 286 ProSitePatterns Zinc finger C2H2 type domain signature. 98 118 IPR013087 -
Tpr2g1805 286 ProSiteProfiles Zinc finger C2H2 type domain profile. 96 123 IPR013087 -
Tpr2g1805 286 PANTHER ZINC FINGER PROTEIN JAGGED 10 286 IPR045320 GO:0003700
Tpr2g1805 286 MobiDBLite consensus disorder prediction 29 43 - -
Tpr2g1805 286 Pfam C2H2-type zinc finger 96 120 - -
Tpr2g1805 286 SUPERFAMILY beta-beta-alpha zinc fingers 93 124 IPR036236 -
Tpr2g1805 286 MobiDBLite consensus disorder prediction 1 43 - -
Tpr2g1805 286 Gene3D Classic Zinc Finger 77 140 - -
Tpr2g1805 286 PANTHER AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN, PUTATIVE-RELATED 10 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1805 Tpr-Chr2 21364269 21365129 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g1805 86 178 C2H2 Transcription Factor Family AT5G10970 41.935 2.25e-14 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1805 - - mtr:MTR_3g011970 315.079