Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1793 ATGCTTTGTGCAACTGGCGCTGGCGCTAAAAATATCGGAAAATTCACTTTTTCCCGGGAAACCAAAAACCCCACTCCAAACCAAAAAAAAAAAAAAAACACACTAACCAAAGCATCGCATATTTATATTCAAACAATCACACGAAGAAATTACAAGTACCTTCCATCAACATCCACACTCTCTCCCCCACTCACTCTCACCACAACTGTCAATTCCGGCAACTTCTCCGATCACTTCCCGGCGACTTCTCATCTCAAACCATGGCATCAGAATGAATCTCATCCACTCCCGATGTCGATTTCCTACTCCAACTTCTTCTCCGATTCCGACCTCCTATGCGGCGAGGAGACATCCAGCATCTTATCCACAGATTCGCCGACGGATTGTTTCTCCGATGTCGATTCGTCTCCGTCGCCGGAGGATGAGTTCATCGCCGGATTAATCGAAGACGAACGTAAGTTCGTTCTCGGATTCGATTATTTCTCTAAGTTACAGTCTCGTTCGCTTGATTCATCCGCTAGAGATGAATCCATTGCATGGATCCTTAAGGTGCAGGCTTATTATGGATTTCAACCGCTTACGGCTTATCTTGCCGTCAATTACATGGATCGGTTTTTGAATAATCGGCGGTTGCCGCAAACAAATGGGTGGCCATTGCAACTTCTATCAGTTGCTTGCTTGTCTTTAGCGGCCAAAATGGAGGAAACTCTAGTCCCTTCTCTATTGGACCTTCAGGTAGAAGGTGCTAAATACTTATTTGAGCCAAAAACAATTAGAAGAATGGAGCTACTTGTTCTAAGCATCTTGGATTGGAGGCTAAGATCAGTTACCCCATTTAGCTTCCTAAGTTTCTTTGCATGCAAGTTAGATACAACTGGAACTTTAACTGGGTTCCTCATTTCACATGCTTCACAAATTATATTATCTAATATCCAAGAGGCCAGCTTTCTTGCATATTGGCCATCATGCATTGCTGCCGCGGCTATACTCCATGCAGCTAACGAAATTCCTAATTGGTCTCTCGTTAGGCCCGAGCATGCTGAGTCGTGGTGCGAGGGATTGAGAAAAGAGAAAATTATGGGGTGCTACAGATTAATGCAAGGACTCGTGATTGACAATAACCAAAGGAAACCTCCTAAAGTATTGCCACAGATGCGAGTGACAACTCAGCCCCTTGTGAGGTCATGTGTCTCATCATCCTCCTCTTCTCCTTCCTCCTCATCTCCCTATAAAAGAAGGAAATTAAATAACTGTTTGTGGGTAGATGATGACAAAGGATCAAACTCCCAATGA 1293 0.4401 MLCATGAGAKNIGKFTFSRETKNPTPNQKKKKNTLTKASHIYIQTITRRNYKYLPSTSTLSPPLTLTTTVNSGNFSDHFPATSHLKPWHQNESHPLPMSISYSNFFSDSDLLCGEETSSILSTDSPTDCFSDVDSSPSPEDEFIAGLIEDERKFVLGFDYFSKLQSRSLDSSARDESIAWILKVQAYYGFQPLTAYLAVNYMDRFLNNRRLPQTNGWPLQLLSVACLSLAAKMEETLVPSLLDLQVEGAKYLFEPKTIRRMELLVLSILDWRLRSVTPFSFLSFFACKLDTTGTLTGFLISHASQIILSNIQEASFLAYWPSCIAAAAILHAANEIPNWSLVRPEHAESWCEGLRKEKIMGCYRLMQGLVIDNNQRKPPKVLPQMRVTTQPLVRSCVSSSSSSPSSSSPYKRRKLNNCLWVDDDKGSNSQ* 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1793 430 PANTHER CARBOXY-TERMINAL DOMAIN CYCLIN 98 419 - -
Tpr2g1793 430 CDD CYCLIN 178 266 IPR013763 -
Tpr2g1793 430 Pfam Cyclin, N-terminal domain 146 273 IPR006671 -
Tpr2g1793 430 SUPERFAMILY Cyclin-like 137 273 IPR036915 -
Tpr2g1793 430 SMART cyclin_7 179 267 IPR013763 -
Tpr2g1793 430 SMART Cyclin_C_2 276 405 IPR004367 -
Tpr2g1793 430 ProSitePatterns Cyclins signature. 174 205 IPR006671 -
Tpr2g1793 430 Gene3D - 157 274 - -
Tpr2g1793 430 Pfam Cyclin, C-terminal domain 276 386 IPR004367 -
Tpr2g1793 430 SUPERFAMILY Cyclin-like 258 377 IPR036915 -
Tpr2g1793 430 PIRSF Cyclin_A_B_D_E 11 56 IPR039361 -
Tpr2g1793 430 PIRSF Cyclin_A_B_D_E 158 408 IPR039361 -
Tpr2g1793 430 PANTHER CYCLINS 98 419 IPR039361 -
Tpr2g1793 430 Gene3D - 147 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1793 Tpr-Chr2 21214394 21219285 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g1793 96 429 Core Cell Cycle Gene Families AT1G70210 62.908 1.18e-137 396
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1793 K18810 - gmx:100780369 524.242
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g1793 2 21214394 21219285 Tpr2g1793 2 21214394 21219285 ECH