Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1727 ATGATTGACATGAATGGAAAGATTTTTCCAGAGGACTATAATGATGTGCATTATTATGTAGAGTCACCGGGTTTTGGATATAGTCATAGCAACAATGTAGGTGCAATGCAACATATGAGAACTCCTTCAGACACAACACAACAACAAATTAGTGGTGGCCAAATAGTTTTTAGTTATGAAAATGTTGCTAAAATTACTAACGGGTTTTCAAGTGAAAACGTGATAGGAGAAGGAGGTTTTGGGCGTGTTTACAAGGCTTCAATACCCGATGGTAGAATTGGAGCAGTTAAGTTGTTGAAGGTTGGTAGTGGTCAAGGAGAAAGAGAGTTTAGAGCAGAGGTTGATACTATTAGTCGTGTTCATCATCGACATTTGGTATCGTTGATTGGTTATTGTATATCTGAGCAACAAAGAGTTCTCATTTATGAGTTTGTTCCTAATGGAAATCTTGATCAACATTTGCATGAAAGTGCATGGAATGTTTTGGATTGGCCCAAGAGGATGAAGATAGCAATTGGTGCTGCGAGGGGCCTTGCATATCTACATGAAGGCTGCAACCCAAAGATTATTCACAGAGATATTAAGTCATCGAATATACTTTTGGACAATGCTTATGAGGCTCAGGTTGCAGACTTTGGACTTGCCAAATTAACCGATGCTGCTCATACTCATGTATCAACTAGGGTGATGGGTACTTTTGGCTACATGGCTCCAGAGTATGCAACGACTGGAAAACTAACGGATAGATCAGATGTTTTCTCATTTGGAGTTGTTCTTCTTGAGCTTATAACTGGAAGGAAACCTGTTGATTCAACACAGCCTGTGGGAGAAGAGAGTTTGGTTGAGTGGGCCCGTCCACTTCTCGTTCGTGCAATTGAAACAGGCGACTTTAGTGAACTAGTAGACCCAAGACTTCAACGACAATATATTGACAGTGAAATGGTTAGAATGATTGAAGCAGCTGCAGCATGTGTTCGGCATTCTGGCCCAAAACGACCGCGGATGGTTCAGATTGCAAGAGCCTTGGACAGTGGAGATCAACTATATGATTTATCGAACGGGGTGAAGTATGGTCAGAGCAGAATTTATGATTCTGAAAAGTATCATGAAGACTTAATGAAATTCAAAAGGATGGCTAATGGAAGTTTTGGTGACTCTGCTGAATTTGATATGTACAACACAGAAAACAGTTCAGGAGACATGTCTAGATCTACATTTGTGCCGCCGCCACACACTTCAAGTGGTGATTCACAAATTAGACCTATCCAAAACTAA 1275 0.4055 MIDMNGKIFPEDYNDVHYYVESPGFGYSHSNNVGAMQHMRTPSDTTQQQISGGQIVFSYENVAKITNGFSSENVIGEGGFGRVYKASIPDGRIGAVKLLKVGSGQGEREFRAEVDTISRVHHRHLVSLIGYCISEQQRVLIYEFVPNGNLDQHLHESAWNVLDWPKRMKIAIGAARGLAYLHEGCNPKIIHRDIKSSNILLDNAYEAQVADFGLAKLTDAAHTHVSTRVMGTFGYMAPEYATTGKLTDRSDVFSFGVVLLELITGRKPVDSTQPVGEESLVEWARPLLVRAIETGDFSELVDPRLQRQYIDSEMVRMIEAAAACVRHSGPKRPRMVQIARALDSGDQLYDLSNGVKYGQSRIYDSEKYHEDLMKFKRMANGSFGDSAEFDMYNTENSSGDMSRSTFVPPPHTSSGDSQIRPIQN* 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1727 424 SUPERFAMILY Protein kinase-like (PK-like) 45 342 IPR011009 -
Tpr2g1727 424 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 12 411 - -
Tpr2g1727 424 CDD STKc_IRAK 75 343 - -
Tpr2g1727 424 SMART serkin_6 69 310 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g1727 424 Gene3D Transferase(Phosphotransferase) domain 1 145 357 - -
Tpr2g1727 424 ProSiteProfiles Protein kinase domain profile. 69 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g1727 424 MobiDBLite consensus disorder prediction 396 424 - -
Tpr2g1727 424 Pfam Protein tyrosine and serine/threonine kinase 72 341 IPR001245 GO:0004672|GO:0006468
Tpr2g1727 424 Gene3D Phosphorylase Kinase; domain 1 29 144 - -
Tpr2g1727 424 ProSitePatterns Serine/Threonine protein kinases active-site signature. 189 201 IPR008271 GO:0004672|GO:0006468
Tpr2g1727 424 PANTHER RECEPTOR-LIKE KINASE 12 411 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1727 Tpr-Chr2 20423227 20432219 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g1727 26 405 Trihelix Transcription Factor Family AT1G70460 64.474 1.39e-176 508
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Tpr2g1727 PK_Tyr_Ser-Thr 1.2e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1727 - - mtr:MTR_5g034210 686.797
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g1727 2 20423227 20432219 Tpr2g1727 2 20423227 20432219 ECH