Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1688 ATGAAGAAAGCAGTCCCTCTCATCTTTTCTCAATGTCTCAAACTTCTTCTCATCAAGTTTGTATTACTATCAGAAACTATAATGGCAGAACCAAGAACCAAGACAGTTATGATCACATGTGGCCATCAAATAGAGCACAACACAAGCATCTTTGTTTCAAATTTTGTTGCAACCATGGAGAAGATTAGCGAGCAGATGCGCAGTACTGGCTTCGGCACAGCAGTTACAGGGACAGGACCTGATGATAACTATGGCCTAGCACAATGCTATGGAGATCTTTCGTTACTTGACTGTGTGTTGTGTTATGCTGAGGCGCGCACGGTTCTTCCTCAGTGCTTCCCTTATAATTCTGGTCGGATTTACCTTGACGGTTGTTTCATGAGGTCTGGGAATTATAGTTTCTTTAATGAGTATAAAGGACCTGAAGATAGAGCTGTATGTGCAAACACAACTAAGAAGAACTCAGATTTTCAAGCAGCGGCAAAACAAGCAGTGTTGAGAGTAGTTCAAGATGCGTCGAACAATAAAGGGTATGCTAGGGGGGAAGTTTCTGTATCAGGAACAGCAAATGAATCTGCTTATGTTCTGGCTGATTGTTGGAGGACCTTGGATTCTAGGTCTTGCAAAGCATGTCTTGAGCATGCATCTTCTTCTATATTGGGATGCTTGCCCTTCTCAGAAGGACGAGCGCTCAACACCGGATGCTTCATGAGGTACTCTGACACTGATTTTCTTAACAAGGAAGTAGAAACTGAGAGTTCAAGAGGTAATGTGGTAGTGGTAGTGGTTGCAGTAGTCAGTTCGGTGGTCGTTGCAGTGGTTGGAGTGGTCATTGGAGCATATATCTGGAAACAGAGATACATTCAAAAGAAAAGAAGAGGATCAAATGATGCAGAAAAGTTAGCAAAGACTCTTGAACAAAAAAGCTTGAACTTCAAGTACTCTACATTGGAAAAAGCTACTGAGTCTTTTAATGACAATAACAAGTTAGGCCATGGAGGATTTGGCACGGTTTATAGAGGAGTTCTACTTGATGGAAGAGAGATTGCTATCAAGAGGTTATATTACAATAACAGACATAGAGCAGCAGATTTCTACAACGAAGTTAACATGATTAGTGGCGTTGAACACAAGAATCTAGTTAGACTATTAGGTTGCTGTTGTTCAGGACCTGAAAGCCTGCTTGTTTACGAATATATGCACAACAGAAGTCTCGATCACTTCATTTTTGATAAAAACAAGGGCAGAGAACTAAATTGGGAAAAGAGATATGAAATAATTATTGGGACAGCTGAAGGATTAGTTTACCTTCACGAGAACTCCAAAATCAGGATAATTCATAGAGATATAAAAGCCAGCAACATTCTATTGGATTCAAAGCTTCGAGCTAAAATTGCAGATTTTGGTTTGGCCAGATCCTTTCAAGAAGACAAGAGCCACATAAGTACAGCTATTGCAGGAACTTTGGGGTATATGGCTCCAGAATATCTTGCTCATGGTCAGTTAACAGAAAAAGCAGATGTATATAGTTTTGGAGTATTACTGCTAGAGATAGTTACCGGAAGACAGAACAACAGGAGCAAAGCATCAGAATATTCAGACAGCTTAATTATAGTGGCATGGAAGCATTTTCAGTCAGGGACTGCCGAACAATTATTTGATCCAAATATAGCATTGCACGACGACCTCAATAGTGATGTTAAGAATGAGATTTTAAGAGTGTTTCATATAGGACTTCTATGCATCCAAGAGGTCGTTTCGTTACGACCAACTATGTCAAAGACGTTACAGATGCTAACTGAAAATGAGGAGTGTCTTGTTGCTCCATCTAATCCACCCTTCTTAGATGAGAGTACCATGGAACTCCATGAGACAAGTGGTGACCCATTTTACCTCCCCAAAACAGCTGATTCAGTTGCTACTATGTCCCATAGCTCTTTCTATCCCAGGTGA 1953 0.4055 MKKAVPLIFSQCLKLLLIKFVLLSETIMAEPRTKTVMITCGHQIEHNTSIFVSNFVATMEKISEQMRSTGFGTAVTGTGPDDNYGLAQCYGDLSLLDCVLCYAEARTVLPQCFPYNSGRIYLDGCFMRSGNYSFFNEYKGPEDRAVCANTTKKNSDFQAAAKQAVLRVVQDASNNKGYARGEVSVSGTANESAYVLADCWRTLDSRSCKACLEHASSSILGCLPFSEGRALNTGCFMRYSDTDFLNKEVETESSRGNVVVVVVAVVSSVVVAVVGVVIGAYIWKQRYIQKKRRGSNDAEKLAKTLEQKSLNFKYSTLEKATESFNDNNKLGHGGFGTVYRGVLLDGREIAIKRLYYNNRHRAADFYNEVNMISGVEHKNLVRLLGCCCSGPESLLVYEYMHNRSLDHFIFDKNKGRELNWEKRYEIIIGTAEGLVYLHENSKIRIIHRDIKASNILLDSKLRAKIADFGLARSFQEDKSHISTAIAGTLGYMAPEYLAHGQLTEKADVYSFGVLLLEIVTGRQNNRSKASEYSDSLIIVAWKHFQSGTAEQLFDPNIALHDDLNSDVKNEILRVFHIGLLCIQEVVSLRPTMSKTLQMLTENEECLVAPSNPPFLDESTMELHETSGDPFYLPKTADSVATMSHSSFYPR* 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1688 650 CDD STKc_IRAK 330 601 - -
Tpr2g1688 650 Gene3D - 144 244 IPR038408 -
Tpr2g1688 650 Gene3D - 33 134 IPR038408 -
Tpr2g1688 650 ProSitePatterns Protein kinases ATP-binding region signature. 330 352 IPR017441 GO:0005524
Tpr2g1688 650 Pfam Salt stress response/antifungal 147 241 IPR002902 -
Tpr2g1688 650 Pfam Salt stress response/antifungal 46 131 IPR002902 -
Tpr2g1688 650 SMART serkin_6 324 606 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g1688 650 ProSitePatterns Serine/Threonine protein kinases active-site signature. 445 457 IPR008271 GO:0004672|GO:0006468
Tpr2g1688 650 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 9 631 - -
Tpr2g1688 650 Coils Coil 288 308 - -
Tpr2g1688 650 Pfam Protein tyrosine and serine/threonine kinase 327 524 IPR001245 GO:0004672|GO:0006468
Tpr2g1688 650 ProSiteProfiles Gnk2-homologous domain profile. 139 244 IPR002902 -
Tpr2g1688 650 ProSiteProfiles Protein kinase domain profile. 324 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g1688 650 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 2 9 631 - -
Tpr2g1688 650 Gene3D Phosphorylase Kinase; domain 1 284 399 - -
Tpr2g1688 650 ProSiteProfiles Gnk2-homologous domain profile. 33 134 IPR002902 -
Tpr2g1688 650 Gene3D Transferase(Phosphotransferase) domain 1 400 608 - -
Tpr2g1688 650 SUPERFAMILY Protein kinase-like (PK-like) 308 626 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1688 Tpr-Chr2 20009589 20013353 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g1688 1 650 Receptor kinase-like Gene Family AT1G70520 65.850 0.0 843
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Tpr2g1688 PK_Tyr_Ser-Thr 1.8e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1688 - - gmx:100305420 1073.54