Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1677 ATGAAAATGGCAAGGATCATATTTGTGACCCTTTTGTTTTTCAACTTTGTCATTGTTCCTTCAATAGCTTTTCCTGCTGGATATGGTTTAGATTTACCAAATCCAGGTAATCAAGGTAATAATAATAACAATAATGATCAACCAAAGGAAACACCAAATAATGATGTTGTTAGTAATAATATTGCTAATCTTAAGCAAGGATTTTATAGCGGTAGTTGCCCCAACGCGGAGAAAATTGTGGCGGATGCTCTTGCCGAGATTCTTAAAACGAATCCATATGCAGTGGCTAACCTCCTTCGTCTTCAATTTCATGATTGCTTCGTTGTTGGATGTGATGCATCAATCTTGCTAGACTACTCACCAACAGGAGAACAAGTAGAAAAAAGTTCATTTTTCAATGGTCAACTTCTCAAAGGAGCTGATATAGTTGATGATATAAAAGCAAAACTAGAAGAACAATGTCCAGGAGTAGTATCATGCTCAGATACATTAGCATTCGCAATCAACGAAGGAATGGCCCTTGCAGGTTTACCTCGTAGAGTGCCTCTTGGCGGTCGTAGAGATTCCGTCTATTCCCTTGCATCCGTCGTGGAAGCCAACAACCTTCCAATGCCTAGTTGGCCGATCGAAAGAATGGTTGAGCTCTTTACCAGAAAAGGTTTCACAATTGAAGAAATGGTTATTTTAATTGGTGCACATTCAGTTGGTTCAGTTCATTGCGATATTTTTATGGAAAGAATTTACAATTTCGCAAACACAAGAAAACCTGACCCTACATTACCGGGTCCAGTGATTACTGAGTTCCAACAAGTATGTGCAAATGCCGGGACACCTCAATTTAGAAACCCGCCAGTGAATTTCGATGAGACACCGGCGGTGCTTGATAACTTGTTTTTCAAGAATATGGTATTTAGAAACAAGACAACTATGCTTACAGATTCTCATTTGATTAATGATCCTAGAACAATTCCTATTGTTCAACAGATGGCCAATCAAGATGGTTTGTGGCAACAAAGGTTTCCTGAGGTTATGGATAAAATGAGTGCTATGAATGTTCTTACCGGAAATAATGGTGAAGTGAGAAAGACTTGTAGGTCCACTAATTAA 1107 0.3875 MKMARIIFVTLLFFNFVIVPSIAFPAGYGLDLPNPGNQGNNNNNNDQPKETPNNDVVSNNIANLKQGFYSGSCPNAEKIVADALAEILKTNPYAVANLLRLQFHDCFVVGCDASILLDYSPTGEQVEKSSFFNGQLLKGADIVDDIKAKLEEQCPGVVSCSDTLAFAINEGMALAGLPRRVPLGGRRDSVYSLASVVEANNLPMPSWPIERMVELFTRKGFTIEEMVILIGAHSVGSVHCDIFMERIYNFANTRKPDPTLPGPVITEFQQVCANAGTPQFRNPPVNFDETPAVLDNLFFKNMVFRNKTTMLTDSHLINDPRTIPIVQQMANQDGLWQQRFPEVMDKMSAMNVLTGNNGEVRKTCRSTN* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1677 368 SUPERFAMILY Heme-dependent peroxidases 64 368 IPR010255 GO:0004601|GO:0006979|GO:0020037
Tpr2g1677 368 ProSitePatterns Peroxidases proximal heme-ligand signature. 225 235 IPR019793 -
Tpr2g1677 368 PRINTS Haem peroxidase superfamily signature 95 109 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr2g1677 368 PRINTS Haem peroxidase superfamily signature 158 175 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr2g1677 368 PRINTS Haem peroxidase superfamily signature 176 188 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr2g1677 368 PRINTS Haem peroxidase superfamily signature 225 240 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr2g1677 368 PRINTS Haem peroxidase superfamily signature 287 302 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr2g1677 368 CDD secretory_peroxidase 63 367 IPR033905 GO:0004601|GO:0042744
Tpr2g1677 368 Gene3D Peroxidase, domain 2 203 347 - -
Tpr2g1677 368 PRINTS Plant peroxidase signature 73 92 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr2g1677 368 PRINTS Plant peroxidase signature 97 117 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr2g1677 368 PRINTS Plant peroxidase signature 138 151 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr2g1677 368 PRINTS Plant peroxidase signature 157 167 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr2g1677 368 PRINTS Plant peroxidase signature 176 191 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr2g1677 368 PRINTS Plant peroxidase signature 224 236 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr2g1677 368 PRINTS Plant peroxidase signature 342 355 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr2g1677 368 PANTHER PEROXIDASE 47 366 - -
Tpr2g1677 368 ProSiteProfiles Plant heme peroxidase family profile. 63 368 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr2g1677 368 Gene3D - 68 368 - -
Tpr2g1677 368 ProSitePatterns Peroxidases active site signature. 95 106 IPR019794 GO:0004601
Tpr2g1677 368 PANTHER PEROXIDASE 25-RELATED 47 366 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr2g1677 368 Pfam Peroxidase 81 331 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1677 Tpr-Chr2 19838688 19840778 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g1677 61 368 Peroxidase AT5G17820 38.782 1.10e-67 216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1677 K00430 - gmx:100802856 435.647