Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1663 ATGCTTTCTCTACTCGCAGGCACACACCATTACTTACTTCCACCTCCAACCCTTCACAACCGCCATAACCACCACATCAAACCTCTATTCACAACCTCTTCCAACCACCACCGCTTCCATTTCACCCCAAGCCGAATCGCTCTCACCTCTTCCAACCGCATTCTCTTTTCCCATCCTATAAAATCAGCATCTATCAATGAAGTATCCGTTCATAACAATTCAGAAGCTTCCAATGAGTTTCTTAACAAAATACGAAAATTGGTTTCTTTCATTCCTTCAATTTTCCCCGGTGGAACCTGGTGGAACTTCTCCGATGACGATGATGTTCAGTTATATGGTCAACCCGTTACTGTTTGGTATGCTTTGGGGAAAATGTGGAATCTTGTTGCAAAAGATAGATGGGTTATTTTCGCTGCTTTCTCTGCTCTTATTATTGCAGCAGTTTCGGAGATTTCTATACCACATTATTTGACAGCTTGTATATTCTCAGCACAGGGTGGGGATATTGCAGTTTTTCATGGGAATGTGCGTTTGTTGATTCTATTGTGTGTTACTTCTGGAATTTGCAGTGGGATACGAGGTTGCTTTTTTGGCATTGCAAACATGATCCTGGTTAAGAGAATGAGAGAAACATTATACTCTTCCCTTCTTCTTCAGGATATATCATTTTTTGACAATGAAACAGTAGGTGATTTGACAAGTAGACTTGGGGCAGATTGTCAGCAAGTTTCAAGGGTTATCGGAAATGATCTTAATTTAATACTGCGCAATTTCCTTCAGGGGGGAGGTTCATTAATCTACTTGTTGATTTTGTCTTGGCCACTTGGTTTATCTACGTTGGTGATATGCTCTATATTAGCAGCTGTCATGCTACCCTATGGATGGTACCAGAAGAAGGCAGCAAGGTTGATCCAAGAAGTCACTGCTTCTGCTAATAATGTAGCTCAAGAGACATACTCTCTTATTAGAACTGTTCGAGTTTATGGAACCGAAGAAGAAGAACATGGAAGGTACAAATGGTGGCTGGAAAAATTAGCTGACATAAGCTTACGACAAAGCGCTGCATATGGATTTTGGAATTTTAGCTTCAATACTCTTTATCATTCAACTCAGGTTATTGCTGTGCTATTTGGAGGAATGTCTATTCTTGCGGGTCAAATTACAGCAGAGAAACTTACTAAGTTTATACTATACAGTGAATGGTTAATTTATTCAACCTGGTGGGTAGGAGACAACATATCCAATTTGATGCAGTCAGTTGGAGCGAGTGAAAAAGTGTTCAACTTAATGGATCTCTCACCTAGCAGCCAATTCATAACAAGAGGAATGAAGTTGCAAAGTTTAATGGGACATTTGGAGTTTGTAAATGTATCTTTTCACTATTCTACAAGGCCAACGGTATCTGTAGTGCAACATGTAAACTTTGTTGTCAATCCTGGTGAGGTGGTTGCCATTGTTGGTCTTAGTGGTAGCGGAAAAAGCACATTGGTGAATCTTTTGCTCCGTCTCTATGAGCCTACAAGTGGTCAGATTTTGGTAGATGGTGTCCCTCACAAAGACTTGGATGTCATGTGGTGGAGAGAAAGAATCGGTTATGTGGGACAGGAACCGAAGCTATTCCGGATGGACATTAGCTCGAACATCAGATATGGATGTACCCGAGATGTAAAGCAGGAAGATATTGAGTGGGCTGCGACACAGGCCTATGCTCACGACTTTATATCAGCACTTCCTAATGGTTACGAAACACTTGTTGATGACGATCTTTTAAGTGGCGGACAAAAGCAGCGAATTGCTATTGCTAGGGCCATTCTTAGGGACCCAAAAATATTGATCCTTGATGAAGCCACTAGTGCACTGGATGCTGAAAGTGAACATAATGTGAAGGGTGTTCTTCGATCGGTTAGAAGTGATTCTTCATCAAGGAGAAGTGTCATAGTCATAGCACACAGGCTCTCTACCATACAAGCTGCCGACAGGATTATTGTGATGGATAGGGGTCAAATTGTTGAGGATGGAAGTCACAGGGAACTTCTCTTGAAAGACGGTTTATATGCTCGGTTGACTAGAAAACAAGCTGATTCTATGGAATGA 2094 0.4136 MLSLLAGTHHYLLPPPTLHNRHNHHIKPLFTTSSNHHRFHFTPSRIALTSSNRILFSHPIKSASINEVSVHNNSEASNEFLNKIRKLVSFIPSIFPGGTWWNFSDDDDVQLYGQPVTVWYALGKMWNLVAKDRWVIFAAFSALIIAAVSEISIPHYLTACIFSAQGGDIAVFHGNVRLLILLCVTSGICSGIRGCFFGIANMILVKRMRETLYSSLLLQDISFFDNETVGDLTSRLGADCQQVSRVIGNDLNLILRNFLQGGGSLIYLLILSWPLGLSTLVICSILAAVMLPYGWYQKKAARLIQEVTASANNVAQETYSLIRTVRVYGTEEEEHGRYKWWLEKLADISLRQSAAYGFWNFSFNTLYHSTQVIAVLFGGMSILAGQITAEKLTKFILYSEWLIYSTWWVGDNISNLMQSVGASEKVFNLMDLSPSSQFITRGMKLQSLMGHLEFVNVSFHYSTRPTVSVVQHVNFVVNPGEVVAIVGLSGSGKSTLVNLLLRLYEPTSGQILVDGVPHKDLDVMWWRERIGYVGQEPKLFRMDISSNIRYGCTRDVKQEDIEWAATQAYAHDFISALPNGYETLVDDDLLSGGQKQRIAIARAILRDPKILILDEATSALDAESEHNVKGVLRSVRSDSSSRRSVIVIAHRLSTIQAADRIIVMDRGQIVEDGSHRELLLKDGLYARLTRKQADSME* 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1663 697 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 444 692 IPR027417 -
Tpr2g1663 697 Gene3D - 442 697 IPR027417 -
Tpr2g1663 697 Gene3D ABC transporter type 1, transmembrane domain 120 437 IPR036640 GO:0005524|GO:0016021
Tpr2g1663 697 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 452 691 IPR003439 GO:0005524
Tpr2g1663 697 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 137 418 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Tpr2g1663 697 SUPERFAMILY ABC transporter transmembrane region 124 432 IPR036640 GO:0005524|GO:0016021
Tpr2g1663 697 CDD ABC_6TM_TAP 139 426 - -
Tpr2g1663 697 Pfam ABC transporter transmembrane region 139 403 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Tpr2g1663 697 Pfam ABC transporter 471 618 IPR003439 GO:0005524
Tpr2g1663 697 PANTHER ABC TRANSPORTER B FAMILY 77 696 - -
Tpr2g1663 697 PANTHER ABC TRANSPORTER B FAMILY MEMBER 26, CHLOROPLASTIC 77 696 - -
Tpr2g1663 697 SMART AAA_5 479 668 IPR003593 -
Tpr2g1663 697 ProSitePatterns ABC transporters family signature. 590 604 IPR017871 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1663 Tpr-Chr2 19682744 19692506 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g1663 207 697 Calmodulin-binding Proteins AT2G36910 34.394 2.73e-68 241