LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Tpr2g1661	ATGTTGCATTTATTATTTAATCCACACCGAAAGAGAGGGAATGACATACTTTTGTATTTCATCAAACAATCTCTTATTCTCAACCAAATGAAGCCTTATATTTTCTTGTTACCTATGTCTTGGTATATATACCTTCATTTGATTAATCTATTAACCTTAACTTTAATGTGTTTTGGTCCAAACAGAACTTTGACAATGGCACTAGGAAATCAAACAGATCATTTGGCTTTGCTCCAATTCAAGCAACTAATATCTAGTGATCCAAATGGTATCTTAGATTCTTGGAATAGTTCAACTCACTTTTGCAACTGGCATGGAATCATATGCAGTCCCAAGCATCAAAGAGTTACAAAGTTGAAATTGCAAGGATACAAGTTACATGGATCCATATCTCCATTTGTTGGCAATCTCTCACATATGAGATTCCTCAACCTTGGAGATAACAACTTTAACGGAAACATTCCACAAGAGCTGGGTCGTTTGTCAAGATTAAGATATCTTCTTCTACTCAACAACTCGTTGTCCGGAGAATTTCCAATAAACTTGACAAAGTGCTCAGAGCTCAAAAGGATGATGTTAGTTGGAAACAAACTTATTGGAAAAATACCTAGCCAAATTGGTTATCTTCAAAAGCTTCAACATTTCAGGATGGACAAAAATAATTTATCTGGAAAAATTCCACCATCCATAAAGAATCTTGCATCCCTTACTATTTTTATGACGAGTTTTAATAATTTGGAGGGAAATATTCCACAAGAAATTTGCAGCCTAACACAGTTGAAAATTATAGCGGTTCATGCTAACAAATTGTCTGGTATATTTCCTTCTTGTCTTTATAATATATCATCTCTTAATGTGATCTCAATTGCATCCAATGAATTTAGTGGCTCTCTTCCACCCAATATGTTCCACACTCTTCCCAATCTCCAATATTTTTCAATTGGAGGAAATAATTTCTCAGGTCATATACCCACTTCCATTGCAAATGCTTCTACTTTGACAACACTACTTGACATTGATACAAACCATTTTGTCGGACAAGTTCCAAATCTAGGTAAGCTACAAAGTCTTAGATTCCTACATTTAGCTTACAACAATTTAGGAGACAATTCCAAAGAGGATTTGGAATTTTTAAACTCATTGACTAATTGTAGTAAGTTGCGTTTACTCGATTTGACAACTAATAATTTTGAAGGTAGTTTGCAAAAATCTATAGGTAATTTGTCCACCTCGCTTAATCGATTGTCTTTTGGGGATAATCAAATATATGGACAAATTCCTACAGAATTAGGAAATCTAACTAGCTTGAGTCTCTTGTCCATGGAATATAACAATTTTGAAGGAACAATTCCAACTACTTTTGGAAAGTTTCAAAAGATACAAGCGTTAATATTGTACGGAAACAATTTATCAGGGGTTATACCATCTATCATAGGCAACCTCAGTCAATTGTATGCATTGGGACTAGATGGAAATATGTTTGAAGGTAATATTCCTCCAAATATTGGAAATTGTCAAAAGTTACAATACTTAACTCTTTCACAAAACAACCTCAAAGGAGACATACCCTTAGAGATTTTTAACATTTCGTCCTTAACAAACTCCCTAAACTTGTCACATAACTCATTGAGTGGTAGCTTACCAAAAGAAGTGGGTATGCTAAAAAATATTGAAATGATAGATGTTTCTGAGAATAATTTGTCCGGGGACATTCCTGGAACCATTGGTGAATGCATGAGTTTAGAATATCTTTATATGGAAGGGAACTCTATTAGAGGAACCATACCATCCTCTTTGACATCGCTCAAAGGTCTTCAACGTTTAGATCTGTCTAGAAATCAGTTGTCTGGACCAATTCCAAAATTTTTGCAAAATATTTCTTTCCTAGAATATTTCAATGTTTCTTTCAACATGTTGGAAGGTGAAGTACCGACAGATGGTGTATTTGGAAATGCAACTCAAGTGGCAATTATTGGAAACAATAAGCTTTGTGGGGGTATTTCACAGCTGCATCTACCACCATGCCTGTCCAAGGGTAGGAAACATGCAAAACACCGTAAGTTCAGGTTGATAGCAGTGATCGTTAGTGTGGTTTCTTTTCTTCTCATGCTTTCATTTATTATAACTATGTATTGGATAAGGAAAAGAAATCTAAAACGAAATGTTGATTCACCAACAATTGATCAACTAGCTAAGGTTTCATACCAAGACTTACATCGAGGAACAGATGGTTTCTCAGCTAGAAACTTGATCGGATCAGGAAGTTTTGGTTCTGTTTATAGAGCAAATCTTGTTTCGGAAGATAATGTTGTTGCTGTGAAGGTCCTTAACCTCCAAAAGAAGGGAGCTCACAAGAGTTTCTTTGTTGAATGTAATGCACTCAAAAACATTAGACACCGAAATTTAGTTAAGATTTTAACATGTTGTTCAAGTACAGATTACAAAGGCCAAGAATTTAAAGCTTTAGTTTTTGATTACATGAAAAATGGAAGCTTAGAACAATGGTTGCATCCTGAGATTTTAAATGCAGAGACTCCAACATCACTGGACCTCAGTCTTAGATTAAACATCATTATTGATGTTGCTTCTGCATTACATTATCTTCATGAAGAATGTGAGCAATTGGTCATTCATTGTGATCTAAAGCCAAGCAATGTCCTTCTTGATGAAGACATGGTTGCTCATGTGAGTGATTTTGGCATATCAAGACTTGTCTCATCCATTTGTGGTAACAGTAGTACAATTGGAATCAAAGGGAGTGTTGGCTATTCTCCTCCAGAGTATGGAATGGGTTCTGAAGTGTCCACGTGTGGTGACATGTATAGCTTTGGAATCCTTATGTTGGAAATGCTTACCGGTAGAAGACCCACTGATGAAGTTTTCAAAGATGGTCAAAATCTGCATAACTTTGTTGCAATTTCATTTCCTGATAATCTTGAAAATATTTTTTACCCACATATTGTATCAAGAGATGCAGAAGTGACAGAAGATGGAAGCATTGAAAATTCGGAGTGCTTAATTTCACTTTTTAGGATTGGACTTATTTGTTCAATGGAATCGCCGAAGGAAAGAATGAATATTGTGGATGTCACTAGAGACCTTAGCATAATCAAAAAGACCTATCTCACTGGTTTTCGCACTCATAATTAG	3150	0.3527	MLHLLFNPHRKRGNDILLYFIKQSLILNQMKPYIFLLPMSWYIYLHLINLLTLTLMCFGPNRTLTMALGNQTDHLALLQFKQLISSDPNGILDSWNSSTHFCNWHGIICSPKHQRVTKLKLQGYKLHGSISPFVGNLSHMRFLNLGDNNFNGNIPQELGRLSRLRYLLLLNNSLSGEFPINLTKCSELKRMMLVGNKLIGKIPSQIGYLQKLQHFRMDKNNLSGKIPPSIKNLASLTIFMTSFNNLEGNIPQEICSLTQLKIIAVHANKLSGIFPSCLYNISSLNVISIASNEFSGSLPPNMFHTLPNLQYFSIGGNNFSGHIPTSIANASTLTTLLDIDTNHFVGQVPNLGKLQSLRFLHLAYNNLGDNSKEDLEFLNSLTNCSKLRLLDLTTNNFEGSLQKSIGNLSTSLNRLSFGDNQIYGQIPTELGNLTSLSLLSMEYNNFEGTIPTTFGKFQKIQALILYGNNLSGVIPSIIGNLSQLYALGLDGNMFEGNIPPNIGNCQKLQYLTLSQNNLKGDIPLEIFNISSLTNSLNLSHNSLSGSLPKEVGMLKNIEMIDVSENNLSGDIPGTIGECMSLEYLYMEGNSIRGTIPSSLTSLKGLQRLDLSRNQLSGPIPKFLQNISFLEYFNVSFNMLEGEVPTDGVFGNATQVAIIGNNKLCGGISQLHLPPCLSKGRKHAKHRKFRLIAVIVSVVSFLLMLSFIITMYWIRKRNLKRNVDSPTIDQLAKVSYQDLHRGTDGFSARNLIGSGSFGSVYRANLVSEDNVVAVKVLNLQKKGAHKSFFVECNALKNIRHRNLVKILTCCSSTDYKGQEFKALVFDYMKNGSLEQWLHPEILNAETPTSLDLSLRLNIIIDVASALHYLHEECEQLVIHCDLKPSNVLLDEDMVAHVSDFGISRLVSSICGNSSTIGIKGSVGYSPPEYGMGSEVSTCGDMYSFGILMLEMLTGRRPTDEVFKDGQNLHNFVAISFPDNLENIFYPHIVSRDAEVTEDGSIENSECLISLFRIGLICSMESPKERMNIVDVTRDLSIIKKTYLTGFRTHN*	1050

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Tpr2g1661	1049	ProSiteProfiles	Protein kinase domain profile.	745	1042	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Tpr2g1661	1049	Gene3D	Phosphorylase Kinase; domain 1	726	826	-	-
	Tpr2g1661	1049	Pfam	Leucine rich repeat	259	319	IPR001611	GO:0005515
	Tpr2g1661	1049	PANTHER	LRR RECEPTOR-LIKE KINASE	58	1043	-	-
	Tpr2g1661	1049	ProSitePatterns	Protein kinases ATP-binding region signature.	751	774	IPR017441	GO:0005524
	Tpr2g1661	1049	Gene3D	Ribonuclease Inhibitor	72	222	IPR032675	-
	Tpr2g1661	1049	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	876	888	IPR008271	GO:0004672\|GO:0006468
	Tpr2g1661	1049	Pfam	Leucine Rich Repeat	605	625	IPR001611	GO:0005515
	Tpr2g1661	1049	Gene3D	Ribonuclease Inhibitor	223	332	IPR032675	-
	Tpr2g1661	1049	SUPERFAMILY	Protein kinase-like (PK-like)	721	1035	IPR011009	-
	Tpr2g1661	1049	SUPERFAMILY	L domain-like	410	665	-	-
	Tpr2g1661	1049	SMART	serkin_6	745	1042	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Tpr2g1661	1049	Gene3D	Transferase(Phosphotransferase) domain 1	827	1044	-	-
	Tpr2g1661	1049	PANTHER	OS04G0122200 PROTEIN	58	1043	-	-
	Tpr2g1661	1049	Pfam	Protein kinase domain	748	966	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Tpr2g1661	1049	Gene3D	Ribonuclease Inhibitor	337	684	IPR032675	-
	Tpr2g1661	1049	Pfam	Leucine rich repeat N-terminal domain	71	110	IPR013210	-
	Tpr2g1661	1049	SUPERFAMILY	L domain-like	71	367	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Tpr2g1661	Tpr-Chr2	19664493	19668785	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Tpr2g1661	65	1047	Receptor kinase-like Gene Family	AT3G47570	45.691	0.0	853

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-XII-1	Tpr2g1661		Pkinase	2.1e-39	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Tpr2g1661	-		-	mtr:MTR_5g025930	1420.6