Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1645 ATGGAATTTGAAGAAGATCAAGAAGAACAAGAGGAAGAGTTATGTGCGAGTTATGACTCGTTACCTAACTCATCCCGAGTTAAGATGCCAGGTGGAACTGAACCTATCATGGTGTCTCAGCCACTCAGAAACATCATGGTTAACAACAACAACAACAACAACGGAAACAGTAACATCGGTGTCGGAAACGGAAAATCAAGGTATAGAGAGTGTTTAAAGAATCATGCTGTCGGAATTGGTGGTCATGCTCTCGACGGTTGCGGCGAGTTTATGCCAGCTGGAAATGAAGGAAGTTTGGAGTCTTTAAAATGTGCTGCTTGTAATTGCCACCGTAATTTCCATCGCAAAGAGACGACGGATATTATTACTGGCGGTGGTGACCCTTTTCTGTTGACACATCATGGTCACCACCTACCACCTCCGCCGCAATTTGCGGCGTACTATCGTACCCCGGCCGGGTATTTGCATGTTTCTGGACAGCAAAGGCCGGGGACGCTTGCTCTGCCATCCACCTCCGGTGGAGGTGGAGGGACTCAGAGTACGAGAGAAGAGCAAGAAGATGTTTCGAATCCAAGTGGCGGTGGGTCGAGTAAGAAAAGACATAGAACAAAGTTCACACCGGAGCAGAAAGATAAGATGTTGGAATTAGCTGAGAAATTGGGTTGGAGAATTCAGAAACATGATGAAGGTTTGGTTCAAGATTTTTGCAATGAAAGTGGTGTTAAGCGTCATGTTCTTAAGGTTTGGATGCATAACAACAAACACACTCTTGGTAAGAAGCCCTAG 786 0.4567 MEFEEDQEEQEEELCASYDSLPNSSRVKMPGGTEPIMVSQPLRNIMVNNNNNNNGNSNIGVGNGKSRYRECLKNHAVGIGGHALDGCGEFMPAGNEGSLESLKCAACNCHRNFHRKETTDIITGGGDPFLLTHHGHHLPPPPQFAAYYRTPAGYLHVSGQQRPGTLALPSTSGGGGGTQSTREEQEDVSNPSGGGSSKKRHRTKFTPEQKDKMLELAEKLGWRIQKHDEGLVQDFCNESGVKRHVLKVWMHNNKHTLGKKP* 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1645 261 MobiDBLite consensus disorder prediction 170 208 - -
Tpr2g1645 261 SUPERFAMILY Homeodomain-like 187 259 IPR009057 -
Tpr2g1645 261 MobiDBLite consensus disorder prediction 1 25 - -
Tpr2g1645 261 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 68 117 IPR006456 -
Tpr2g1645 261 MobiDBLite consensus disorder prediction 1 15 - -
Tpr2g1645 261 MobiDBLite consensus disorder prediction 170 196 - -
Tpr2g1645 261 Gene3D - 182 258 - -
Tpr2g1645 261 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 47 260 - -
Tpr2g1645 261 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 1 47 260 - -
Tpr2g1645 261 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 67 117 IPR006456 -
Tpr2g1645 261 TIGRFAM homeo_ZF_HD: homeobox domain, ZF-HD class 198 254 IPR006455 -
Tpr2g1645 261 Pfam ZF-HD protein dimerisation region 66 118 IPR006456 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1645 Tpr-Chr2 19399022 19400381 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g1645 64 257 ZF-HD Transcription Factor Family AT4G24660 54.124 1.03e-65 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Tpr2g1645 ZF-HD_dimer 1.7e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1645 - - gmx:100795063 313.153