Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1619 ATGGATGCAACACAAAAAGAGAAAATCTATGTTGCTGTTGGTGATGATGCACAAGATGGATTTAATACTTTGAATTGGGCTCTCAAAAAATGGAATTCTCATCCAATTTCCATTGTTATTCTTCATGTGACTCATAATATTTCTAAGGATTATGTGTATACACCATTTGGAAAACTTCCAGCAAGATCTTTGAATGATGAGAAACTTGAAGCTCTAAGAAAAGATGAGAAAGAGAGGATCAAGAAGTTGTTTTCCAAATATATTGCTTTTTGTGGCAAGGTGTCAGCAGAAATCCATGAACTTGAGAAACTTGACGAGCCTATGCAAAAGCGCATCATAGACTTAATAATTGGGCTAGGAATTACCAAATTAGTCATGGGATTTTCATTCATGAAGCCTTCCTTGAAATCAAAAGGTGCTATTAGTGGACTATTCTATGTTCATCAACACAAGCCTAGTTTATGTGAATTATTCATTATATGTGGTGGCAAGCAAGTTTTTCTAAGGGGAAACAATGATGAGAAAATCATGGAAGATGATAGTGGAGTCATGGTTGCTAAAATGAGAGATAAGGTAACTTTTAAAGATTGGCTAGACAAAATGTTCAGTGACAAAACCAATGATTATTCTCAGAATAGATTAAGTGCATCTCCTTCAATAATTAATTTGGTCCAAAATCAATGGGAATTTTATCTTCAAGACATAGAAAATTATTATCAAGAATTATTATCATCAAATTTGGAAGAAGGAAGCTATGTGCAAGACAATGATAACTCACACATTAGTCCAATTGAGCCACATGTCACAGAGTTGAACAATTCTAATAAGAATACTACAGGAAAAATTGAGATCATGAAAAATAAGCTAAACGAAGCTCACAAAACCATCGAGTTGAAGAGGAAAGAGACTAAGGAAAATATAGAGAGACGCACAAAAGCTGAATGGGCAATTAGCTTATGCAACAGCAGGGCCGAAGAAATTGAAGGTAGAATAAGGGAAGAAGTAAGTACAAAAGAGGGCATAAAGAAGGAATTGCAATTGGAGAAAGATCAAAGAGAAGAAATGACAATCGAGATTGAAGAGAGGAAACGAAGAATGAGTTCATTGGTAGAGCTTCAATCAGAACTATCAAACAAGCTTCAAATTTCAACAATAGCAAGATCAAGAGCAGAGACACAAGTAGAGAGAGCAGTGAGGGAGAGGGCCGAAATGGTGAGAGAGATAGAAGAGTTAAGGAAGCAAAGAGATGTGTTGAATAGAAGGATCGAGTTTTGCAAGCAAAAGGATGCCATAGGTATGGCCGCGAGACTAAGCGACAATGGAGCGAGTTTTGAGATGAGGGAGTATAGTGAGGTGGAGTTGAGGTTGGCGACCGATAACTTTTCGGAGCGGTTGAGGTTGAAGTCTGGTGGGGATTGGAGTAATGTATATAGAGGACGCTTCAACCATTCCAGTGTTGCAATTAAGTTGTTACCTTCTTTTGCTTCTTTGTCTCGAGAGGATTTTCAATCCAAGATGAGGTTTCTTGGTGATATTAGGCAACCACATCTAGTAGCCATGGTGGGCTTCTGCTCTGAGCCCAAATGCATAATTTTGGAATACATGGGCAACGGAAGCTTACAAGACATGCTATTTTCTAGGCGAAGAAATCGGGGTTTACGGTGGCACGATCGAATACGAATAGCGACAGAAGTTTGCTCGGGCTTGGGCTTTCTTAACTCATCTCAACAAAGGCCCATTCTTCATTGTCATGTAAACCCTGCCCACATTCTTCTCGACCGCAATTTAGTCGCAAAAATCACGGGCTTTGGGCTTCAAGACTGCGACGACAAGGAATGCAACGTTGAGTCGGATTTACGGAGCGTAGGGATTTTGTTGATGCAGCTTTTGACCGGAAGAAATTGGGCTGGGCCCATTGAAGAGCCCATCACAATGGATAGAGAAACATTGGTTAATGTTCTTGATGACATGGCTGGACAATGGCCATTGGATCTAGCAAAAGAGATTGTGAACCTGGCTATGATTTGCATGTCTGTGAAAAGCAAGCCCAGCCTAAATTTAAGCATTGCAAGGGTCTTAGAGGAACTCAATAAGATTAGAAGAAAGGGTGATGAAATAGTTGCAAAGGAGGATAGAAAGGTAATTATTGGTGGATGCATAGATAGAGAGGGCTCTAGTGATGTTCCTAGTGTTTTCCTTTGCCCTATACTTCAGGAGGTAATGAAAAATCCACATGTGGCAGCAGATGGATTTTCCTATGAGCTGGAAGCAATAGAACAGTGGTTGCATTCAGGACATGATACATCACCAATGACAAATTTAAGGCTGAAACACACATTACTTACACCAAATTACACACTCCGTTCCTTCCTAGAGGAATGGCAAACCAAACAATCAACTCAAATTGCAAACTAA 2415 0.3942 MDATQKEKIYVAVGDDAQDGFNTLNWALKKWNSHPISIVILHVTHNISKDYVYTPFGKLPARSLNDEKLEALRKDEKERIKKLFSKYIAFCGKVSAEIHELEKLDEPMQKRIIDLIIGLGITKLVMGFSFMKPSLKSKGAISGLFYVHQHKPSLCELFIICGGKQVFLRGNNDEKIMEDDSGVMVAKMRDKVTFKDWLDKMFSDKTNDYSQNRLSASPSIINLVQNQWEFYLQDIENYYQELLSSNLEEGSYVQDNDNSHISPIEPHVTELNNSNKNTTGKIEIMKNKLNEAHKTIELKRKETKENIERRTKAEWAISLCNSRAEEIEGRIREEVSTKEGIKKELQLEKDQREEMTIEIEERKRRMSSLVELQSELSNKLQISTIARSRAETQVERAVRERAEMVREIEELRKQRDVLNRRIEFCKQKDAIGMAARLSDNGASFEMREYSEVELRLATDNFSERLRLKSGGDWSNVYRGRFNHSSVAIKLLPSFASLSREDFQSKMRFLGDIRQPHLVAMVGFCSEPKCIILEYMGNGSLQDMLFSRRRNRGLRWHDRIRIATEVCSGLGFLNSSQQRPILHCHVNPAHILLDRNLVAKITGFGLQDCDDKECNVESDLRSVGILLMQLLTGRNWAGPIEEPITMDRETLVNVLDDMAGQWPLDLAKEIVNLAMICMSVKSKPSLNLSIARVLEELNKIRRKGDEIVAKEDRKVIIGGCIDREGSSDVPSVFLCPILQEVMKNPHVAADGFSYELEAIEQWLHSGHDTSPMTNLRLKHTLLTPNYTLRSFLEEWQTKQSTQIAN* 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1619 804 Coils Coil 338 365 - -
Tpr2g1619 804 ProSiteProfiles Protein kinase domain profile. 462 707 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g1619 804 SUPERFAMILY RING/U-box 725 800 - -
Tpr2g1619 804 SMART Ubox_2 731 794 IPR003613 GO:0004842|GO:0016567
Tpr2g1619 804 Pfam U-box domain 728 798 IPR003613 GO:0004842|GO:0016567
Tpr2g1619 804 Gene3D Transferase(Phosphotransferase) domain 1 536 716 - -
Tpr2g1619 804 PANTHER OS02G0152300 PROTEIN 5 797 - -
Tpr2g1619 804 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 726 803 IPR013083 -
Tpr2g1619 804 Coils Coil 387 428 - -
Tpr2g1619 804 SUPERFAMILY Protein kinase-like (PK-like) 445 681 IPR011009 -
Tpr2g1619 804 Pfam Protein tyrosine and serine/threonine kinase 471 608 IPR001245 GO:0004672|GO:0006468
Tpr2g1619 804 ProSiteProfiles U-box domain profile. 727 801 IPR003613 GO:0004842|GO:0016567
Tpr2g1619 804 Gene3D Phosphorylase Kinase; domain 1 434 535 - -
Tpr2g1619 804 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 50-RELATED 5 797 - -
Tpr2g1619 804 Coils Coil 282 306 - -
Tpr2g1619 804 CDD RING-Ubox_WDSUB1_like 732 773 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1619 Tpr-Chr2 19102536 19107859 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g1619 3 804 U-box Gene Family AT5G65500 47.719 0.0 727
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Tpr2g1619 PK_Tyr_Ser-Thr 1.7e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1619 - - gmx:100786771 1202.96