Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1594 ATGGCTGAAAGTTTTGACAGTGCTACATCTAATCTTTTATGTTCTGAGAACAATAGCACATGTTTTGATGATGATTTGGAATGTAATGATGTTTTTGATGGTTCTGGTATTATCTCACCTTCATGGGATTACACAAACCTTAACTTAGACAACGTTGGATCGGATTCATTTGTTTGTTTTGTTGCACTGAGTGAAGAAATTGTGAGGGTTATGGTTGATAAAGAGAAGGATCATTTGCCAAGAGATGATTATTTGATGAGATTGCGTAGTGGTGATTTGGATTTGAGTGTTAGAAGAGAAGCTCTTGATTGGATTTGGAAGGCTCATGCTTACTATGGATTTGGACCCTTGAGTCTTTGCCTATCTGTGAACTACTTGGATCGGTTCCTATCGGTTTACCAATTACCGAAAGGTGTGAGTTGGACTGTGCAATTGTTAGCTGTAGCTTGCTTTTCACTTGCTGCTAAAATGGAGGAAGTGAAAGTGCCTCATTCTGTAGATTTGCAGGTTGGAGAACCAAGGTTTGTATTCCATGCTAAAACCATTCAAAGAATGGAACTAATGGTACTAAGCACATTAGGATGGAAAATGCAGGCATTAACTCCTTGTTCCTTCATAGACTATTTCCTTGCTAAGATCAGTTGCGAAAAACTTGCCGAAAAGTCATCGATTGCAAGATCAGTACAGCTTATCCTAAACATAATCAAGGGTATTGACTTCTTGGAATTCAGGTATTCTGAAATCGCTGCAGCGGTAGCAATTTCTGTTTTAAAGGAGATTCCAGTACAAGAAGTTGATAAGGCCATAACTGATTTTGTCATTGTAGAAAAGGATAGAGTTCTAAAGTGTGTTGAATTGATAAAAGATCTTTCCTTGATCAAGGTTGGTGGTACCAAGTATACAACATTTGTGCCTCAAAGTCCTATTGGGGTGCTTGATACAGGAGGGTGCATGAGTTTTAAGAGCGATGAATTAACAAATGGGTCATGTCCAAATTCTTTACATAATAGTCCAAATACTAAAAGGAGAAAAATTGATGGACCTTCAAATGGATCTTCACAATCATGA 1068 0.3783 MAESFDSATSNLLCSENNSTCFDDDLECNDVFDGSGIISPSWDYTNLNLDNVGSDSFVCFVALSEEIVRVMVDKEKDHLPRDDYLMRLRSGDLDLSVRREALDWIWKAHAYYGFGPLSLCLSVNYLDRFLSVYQLPKGVSWTVQLLAVACFSLAAKMEEVKVPHSVDLQVGEPRFVFHAKTIQRMELMVLSTLGWKMQALTPCSFIDYFLAKISCEKLAEKSSIARSVQLILNIIKGIDFLEFRYSEIAAAVAISVLKEIPVQEVDKAITDFVIVEKDRVLKCVELIKDLSLIKVGGTKYTTFVPQSPIGVLDTGGCMSFKSDELTNGSCPNSLHNSPNTKRRKIDGPSNGSSQS* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1594 355 PANTHER CYCLIN-D4-1-LIKE 1 347 - -
Tpr2g1594 355 CDD CYCLIN 98 190 IPR013763 -
Tpr2g1594 355 Pfam Cyclin, N-terminal domain 66 197 IPR006671 -
Tpr2g1594 355 SMART cyclin_7 103 191 IPR013763 -
Tpr2g1594 355 MobiDBLite consensus disorder prediction 329 355 - -
Tpr2g1594 355 PANTHER CYCLINS 1 347 IPR039361 -
Tpr2g1594 355 Pfam Cyclin, C-terminal domain 201 300 IPR004367 -
Tpr2g1594 355 ProSitePatterns Cyclins signature. 98 129 IPR006671 -
Tpr2g1594 355 Gene3D - 81 198 - -
Tpr2g1594 355 SUPERFAMILY Cyclin-like 55 197 IPR036915 -
Tpr2g1594 355 Gene3D - 71 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1594 Tpr-Chr2 18772109 18774977 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g1594 64 260 Core Cell Cycle Gene Families AT5G65420 62.814 2.39e-86 260
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1594 K18810 - gmx:100794010 484.952