Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1580 ATGGCTCTTCCTGGTTCCCTGCAACTGTCTCATGGATTGGGACTTTGCAGGAACCTGAGCTCCAATAAAGATATGAGGGTAAAGGGGAGATGCAAGTTACAGTTGTTCAATGCATGTCCTTCATATCCAGTTTCGTTCATGAAACATGACTATAGGGGTCTCCAACACCTCCGTCATATAAACAGGTCAACAAATAGATTGTCTTGCAGATCCCGCTCTTTTAAATGTCATTGTTTCTTAGTGCCAGGCCAACACATTCCTGCCGTTAAGGTGGCTACTACAGTGCTAACAAGGTGCTGTAATGTGTTACAAAATAGTCCAGTCGTTGTAAAGTTGATTCCTGCTGTTGGCATTATCATTTTTGCAGTATGGGGTGTTGGTCCATTAATGTTTCAGACAAGGAAACTATTTTTTCAGAAGAGTGATAATAGCTGGAAAAAAAGTACCACTCATTACATAGTTACTTCATATCTTCGACCATTACTGTTATGGACTGGAGCCATACTTATTTGCAGAGCATTTGAGCCAGTAATTCTACCTACAGAAACTAGCCAGGCTGTTAAGGAACGACTTCTGAGTTTCGTTAAATCATTGTCGACTGTAGTGGCTTTTGCCTATTGTTTATCAAGTGTAATTCAACAAGCACAGAAATTTGTAACAGAGAATGCAGATACAAGCGACACAAGAAATATGGGATTCCAATTTGCAGGCAAAGCTGTTTATTCTGCAGTATGGATTGCTGCCTTTTCATTGTTTATGGAATTGCTAGGCTTCTCTACCCAGAAATGGGTTACAGCAGGAGGTTTTGGGACAGTTTTGTTGACTCTTGCTGGTCGTGAGATATTTACAAACTTCCTTTCAAGCGCGATGATTCATGCAACTCGGCCTTTTGTGGTAAATGAATGGATTCAAACGAAGATTGAAGGATATGAGGTTTCTGGCACTGTTGAGCATGTTGGCTGGTGGTCTCCAACAATTATACGAGGCGAAGACCGTGAAGCTGTACACATTCCAAACCACAAATTTACGGTGAATGTTGTGCGGAACCTCACTCAAAAAACACATTGGAGAATCAAAACCCACCTAGCCATTAGTCATTTGGATGTAAATAAGATTAATATCATTGTTGCTGACATGCGGAAAGTATTAGCCAAAAATCCTCAAGTTGAGCAGCAGAGGTTGCACAGGAGAGTATTTCTTGACAATATAAACCCTGAAAATCAGGCTCTTATGATTCTCATTTCTTGTTTTGTCAAGACCTCACATTTTGAAGAATATTTGTGTGTTAAGGAAACTATACTATTGGATCTTCTTAGAGTTATCAGCCATCACCGGGCCCGGCTTGCAACACCAGTTCGTACCATACAGAAAATATATAGTGATGCTGACTTGGACAACATACCGTACGCAGATTCCACATTCAATGGTGCTGGAACAGTATCTAACCGTCCATTATTAGTGATCGAATCACCTTACAAGAACAGTGCAGATGATAAAACGAAAAGTCGAGCAGCACGTGCAACTGTTGATCAAGATAACAAAACAGCTGTGAAAACCAAACTTGATACCAAGACAGACGACAAGGTTGGACCAATAGGAGCACCAGATACCAAGGTTAGAGGAACGCAAGATGAATCTGAGGTGGATGCCAAAGTCATGGCATCTAACTCTGATGCAAATGGAAACTCTAAACCCGATTCTGAAATGGGTGAAAACAAGCCACTCAAATCAAATGTAAACAAGGTAAATGTGGAGGTGCCAACCATGTCTTCTAATTCTACCCCAAAAGTACCTGGTTCCGAAGTAGATAACTCAACCCAGAAGGACATCCATGTCAAACAATCCAAGGGTCAAACCATTAAAAACATCAAACCGAACCTCGACTCTGACAATCTAGTGTCCTCATCAACAAACAACACTGACAAAGGCAGTGGAAATACACAAACAAAACAGCAAGGAGAAAGGAAACCTGCTGCATCCAGGCCTATTCTTGAAGAGAATATAGTACTGGGTGTTGCATTGGAGGGATCAAAGAGGACACTTCCTATTGATGAGGGGATTGACCCTGTGGCAACTCAAGAGGCAAAGGAAATGGCTTCACACCAGGGTGGAAATGGTTCTCCAAAGGCTTCAGATGGGAATGTGAAGTAA 2151 0.4152 MALPGSLQLSHGLGLCRNLSSNKDMRVKGRCKLQLFNACPSYPVSFMKHDYRGLQHLRHINRSTNRLSCRSRSFKCHCFLVPGQHIPAVKVATTVLTRCCNVLQNSPVVVKLIPAVGIIIFAVWGVGPLMFQTRKLFFQKSDNSWKKSTTHYIVTSYLRPLLLWTGAILICRAFEPVILPTETSQAVKERLLSFVKSLSTVVAFAYCLSSVIQQAQKFVTENADTSDTRNMGFQFAGKAVYSAVWIAAFSLFMELLGFSTQKWVTAGGFGTVLLTLAGREIFTNFLSSAMIHATRPFVVNEWIQTKIEGYEVSGTVEHVGWWSPTIIRGEDREAVHIPNHKFTVNVVRNLTQKTHWRIKTHLAISHLDVNKINIIVADMRKVLAKNPQVEQQRLHRRVFLDNINPENQALMILISCFVKTSHFEEYLCVKETILLDLLRVISHHRARLATPVRTIQKIYSDADLDNIPYADSTFNGAGTVSNRPLLVIESPYKNSADDKTKSRAARATVDQDNKTAVKTKLDTKTDDKVGPIGAPDTKVRGTQDESEVDAKVMASNSDANGNSKPDSEMGENKPLKSNVNKVNVEVPTMSSNSTPKVPGSEVDNSTQKDIHVKQSKGQTIKNIKPNLDSDNLVSSSTNNTDKGSGNTQTKQQGERKPAASRPILEENIVLGVALEGSKRTLPIDEGIDPVATQEAKEMASHQGGNGSPKASDGNVK* 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1580 716 PANTHER OW CONDUCTANCE MECHANOSENSITIVE CHANNEL 1 716 IPR045042 -
Tpr2g1580 716 MobiDBLite consensus disorder prediction 549 655 - -
Tpr2g1580 716 Gene3D - 297 352 IPR023408 -
Tpr2g1580 716 PANTHER MECHANOSENSITIVE ION CHANNEL-LIKE PROTEIN 1 716 - -
Tpr2g1580 716 MobiDBLite consensus disorder prediction 698 716 - -
Tpr2g1580 716 SUPERFAMILY Sm-like ribonucleoproteins 281 351 IPR010920 -
Tpr2g1580 716 MobiDBLite consensus disorder prediction 675 716 - -
Tpr2g1580 716 MobiDBLite consensus disorder prediction 494 663 - -
Tpr2g1580 716 Pfam Mechanosensitive ion channel 238 445 IPR006685 GO:0016020|GO:0055085
Tpr2g1580 716 Gene3D - 194 295 - -
Tpr2g1580 716 MobiDBLite consensus disorder prediction 494 533 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1580 Tpr-Chr2 18606960 18614952 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g1580 9 716 Mechanosensitive Ion Channel Family AT5G10490 56.022 0.0 746
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1580 K22047 - gmx:100789444 1100.89