Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1568 ATGGCTCGTGCAAGCACTACTAGCAACTCTAGTATTAATCATAACTGGTTATCATTTTCACTCTCACCAATGGAAATGTCTCATCTTGATTCATACGACGTCGCTTCATCCGTTACTAACAACAACACCTCTCATCAAAATCATCATCACTATTTCCTTGACAACATGTTTCACACTGGTTGGGGAAAGAGTACTGAAGTAGTGGCAACTGCACAAGCGCTGGAACAACCGATTTGGTTTATGGATTCAACAACGCAATCACAGAGCGTTGTTAACCACGCGCCGTCACCTAAGCTGAATGATTTTCTCGGTGACAGTCAAGCAGAGACGCAAGATGATTCTTCTTTAACAAACATGTATGATCACCACCATTACTTCGGTGGGGACCACCACCAGCATCAGCAACAGAATCATCAGGATCTTGTTGTTACTGGTTTTCAAGCTTTTTCAAACAACTCTGGTGGTGGTTCTGAAGTTGATGATTCTGGTTCTATTGGAAAATCATCACAAGCTGCATGTGGAAATGAGTTTGGAACTCATTGTGTTGAGTCTGGGAATGAGTTTGCTTACTCAGCTGCGGCTGTTACGGCGGTTAACGGTGCTTTGTCTCTCGCCGTTGCTCGGAGCTCCGAGGATAATGCTATTGTGGTTGCTGATTCTGATAGCTCCAAGAAAATCGCTGATACTTTTGGTCAGCGAACTTCAATTTACCGTGGTGTTACTAGGCATAGATGGACTGGAAGATATGAAGCGCATCTTTGGGATAACAGCTGTAGAAGGGAGGGTCAAGCTAGGAAAGGGCGTCAAGTCTATTTGGGTGGATATGACAAGGAGGAAAAGGCCGCAAGATCCTATGATTTGGCTGCCCTAAAGTATTGGGGACCCACTGCTACTACCAACTTCCCTGTTTCCAGTTATGTAAAGGAATTGGAAGAAATGAAAGAAGTAACTAAGCAAGAATTTATTGCGTCACTGCGGAGGAAGAGTAGTGGCTTTTCAAGAGGAGCTTCAATCTACAGGGGTGTTACAAGGCATCACCAACAGGGTAGGTGGCAAGCGAGAATTGGCCGTGTTGCCGGAAACAAAGACCTGTACTTGGGAACATTTGCAACTGAAGAGGAAGCGGCAGAGGCGTACGACATTGCAGCAATAAAATTCCGAGGTGCAAATGCAGTCACAAACTTTGAGATGAACAGATATGATGTGGATGCCATAATGCAGAGTTCTCTTCCGGTTGGTAGTACAGCGAAGCGCGTGAAGCGATCACTTGGGTCTGAACAGAAAGCTTCTGTAACCAGCAATATTCAGCAGCAGAACAACGCGGAACAGTATGCAGCATGCATGATCAATAGCAACAAAAGCAGCAACATTAATTTCTCAACCATTCCGCATCAGCTGCCAGCTGCACTGAGTACAGTCCCTTATGGAATGGTCCCCTATGATTCGAATCCTTCGGCTTATTATCATCACACCCTCTTCCAACATTTCAATTCTGAATCCAATGATGGCGCTGCAGAATCTGTTGTGAATTCCACCAATGCAACAAATGGTGGACTCAATGCCATGCCACCAACATCAGCAGCTGAGTTCTATTTATGGCCTAATCAGTCTTATTGA 1617 0.4484 MARASTTSNSSINHNWLSFSLSPMEMSHLDSYDVASSVTNNNTSHQNHHHYFLDNMFHTGWGKSTEVVATAQALEQPIWFMDSTTQSQSVVNHAPSPKLNDFLGDSQAETQDDSSLTNMYDHHHYFGGDHHQHQQQNHQDLVVTGFQAFSNNSGGGSEVDDSGSIGKSSQAACGNEFGTHCVESGNEFAYSAAAVTAVNGALSLAVARSSEDNAIVVADSDSSKKIADTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQARKGRQVYLGGYDKEEKAARSYDLAALKYWGPTATTNFPVSSYVKELEEMKEVTKQEFIASLRRKSSGFSRGASIYRGVTRHHQQGRWQARIGRVAGNKDLYLGTFATEEEAAEAYDIAAIKFRGANAVTNFEMNRYDVDAIMQSSLPVGSTAKRVKRSLGSEQKASVTSNIQQQNNAEQYAACMINSNKSSNINFSTIPHQLPAALSTVPYGMVPYDSNPSAYYHHTLFQHFNSESNDGAAESVVNSTNATNGGLNAMPPTSAAEFYLWPNQSY* 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1568 538 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR AIL6 13 534 - -
Tpr2g1568 538 SMART rav1_2 236 308 IPR001471 GO:0003700|GO:0006355
Tpr2g1568 538 SMART rav1_2 338 402 IPR001471 GO:0003700|GO:0006355
Tpr2g1568 538 CDD AP2 337 396 IPR001471 GO:0003700|GO:0006355
Tpr2g1568 538 Pfam AP2 domain 236 294 IPR001471 GO:0003700|GO:0006355
Tpr2g1568 538 Pfam AP2 domain 338 388 IPR001471 GO:0003700|GO:0006355
Tpr2g1568 538 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 13 534 - -
Tpr2g1568 538 CDD AP2 235 304 IPR001471 GO:0003700|GO:0006355
Tpr2g1568 538 SUPERFAMILY DNA-binding domain 235 304 IPR016177 GO:0003677
Tpr2g1568 538 ProSiteProfiles AP2/ERF domain profile. 236 302 IPR001471 GO:0003700|GO:0006355
Tpr2g1568 538 SUPERFAMILY DNA-binding domain 337 397 IPR016177 GO:0003677
Tpr2g1568 538 Gene3D AP2/ERF domain 236 304 IPR036955 GO:0003700|GO:0006355
Tpr2g1568 538 Gene3D AP2/ERF domain 338 398 IPR036955 GO:0003700|GO:0006355
Tpr2g1568 538 ProSiteProfiles AP2/ERF domain profile. 338 396 IPR001471 GO:0003700|GO:0006355
Tpr2g1568 538 PRINTS Ethylene responsive element binding protein signature 237 248 IPR001471 GO:0003700|GO:0006355
Tpr2g1568 538 PRINTS Ethylene responsive element binding protein signature 378 398 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1568 Tpr-Chr2 18423911 18429219 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g1568 80 538 AP2-EREBP Transcription Factor Family AT5G10510 54.049 1.01e-144 426
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-AP2 Tpr2g1568 AP2 6.4e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1568 K09285 - gmx:100775390 593.578