Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1562 ATGCAACTCAGTTATTTGAACGAACCGTCAATTTTATACGATCTACAATATAGATACAATCAAAATATGATTTATACAAAAGTGGGGCCCGTTTTGGTTGCTATAAATCCTTTCAAGAAAGTTCCTCTGTATGGTAACAATTATATTGAAGCCTACAAGCGTAAAGCAACCGAAAGCCCTCATGTATATGCAATTACAGACAGAGTCATCCGAGAACAAGATGAAGTAAATCAATCTATAATTATAAGTGGTGAGAGTGGAGCTGGGAAGACTGTGACAGCAAAGATAGCAATGCAGTACTTGGCTGCTCTTGGAGGTGGAAGTGGAATAGAGTATGAGATACTGAAGACTAATCCAATACTAGAAGCCTTTGGTAATGCAAAAACTTTGAGAAATGACAACTCAAGTCGTTTTGGAAAGCTCATTGAGATTAACTTTAGTGAAACTGGAAAAATTTCTGGTGCTAATATTCAAACATTTTTGCTTGAAAAGTCTAGAGCAGTTCAATGCAATGAAGGGGAAAGGACATATCATATATTTTATCAGCTATGTGGTGGTGCACCACCATCTCTTCGGGGTACCAAGGATAGGATGAGTTGTACAATGGGGGTTTTAAGCTTCACAAGGTTTTGA 633 0.376 MQLSYLNEPSILYDLQYRYNQNMIYTKVGPVLVAINPFKKVPLYGNNYIEAYKRKATESPHVYAITDRVIREQDEVNQSIIISGESGAGKTVTAKIAMQYLAALGGGSGIEYEILKTNPILEAFGNAKTLRNDNSSRFGKLIEINFSETGKISGANIQTFLLEKSRAVQCNEGERTYHIFYQLCGGAPPSLRGTKDRMSCTMGVLSFTRF* 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1562 210 ProSiteProfiles Myosin motor domain profile. 1 210 IPR001609 GO:0003774|GO:0005524|GO:0016459
Tpr2g1562 210 Gene3D Kinesin motor domain 1 202 IPR036961 -
Tpr2g1562 210 Pfam Myosin head (motor domain) 2 192 IPR001609 GO:0003774|GO:0005524|GO:0016459
Tpr2g1562 210 PRINTS Myosin heavy chain signature 25 44 IPR001609 GO:0003774|GO:0005524|GO:0016459
Tpr2g1562 210 PRINTS Myosin heavy chain signature 77 102 IPR001609 GO:0003774|GO:0005524|GO:0016459
Tpr2g1562 210 PRINTS Myosin heavy chain signature 119 146 IPR001609 GO:0003774|GO:0005524|GO:0016459
Tpr2g1562 210 PANTHER P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 1 194 - -
Tpr2g1562 210 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 194 IPR027417 -
Tpr2g1562 210 PANTHER MYOSIN 1 194 - -
Tpr2g1562 210 SMART MYSc_2a 2 209 IPR001609 GO:0003774|GO:0005524|GO:0016459
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1562 Tpr-Chr2 18363070 18370573 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g1562 1 192 Myosins gene family AT1G50360 84.536 5.10e-113 346
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1562 - K10357 gmx:100781736 357.066