Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1551 ATGGATCCGATTCAACTCAACGATTTTCAAAATGACCCACAAACCCTAATTTCAGATCACCACGATTCAGTTATGGATGATTCCAACGACTCCATTTTTGATTCAATCCTCTGTGATTCCACTTCCAGACTCATTCCAACTGGATTCACTGCCAGATATGAAAACCCAGAGGAGTGTGTCATGTTTGTAAATGCGGGAGGGGAAACTTTTAATGAAGCAGCTGGTGGAGTTAAGTTTCTGGGTGACACTTTTTTTGACGGTGGCAATGTTTTTCGCACAAATGAGCCGATAGTGGAAGGTGGAGATTACCCGTCTATATATCAATCAGCTCGGGTGGGAAGTTTTTGTTATAGAATTGATAACCTTTCTCCTGGGGACTATTTTGTTGACCTTCATTTTGTGGAGATTATTAATGTAAATGGGCCAAAAGGAATGAGGGTGTTCGATGTATACATACAAGAAGAAAAGGTTCTATCCGAATTGGATATCTATGCAGTTGTTGGAGTCAACAAGCCACTACAGATGATTGATTATAGAGTCACTGTGAAGGATGACGGGGTTTTAGTCATAAGATTTGAAAGTATAAATGGAAGCCCAGTTGTTAGTGGGATTTGCATTAGGAGAGCGACAACAGTTTCACCAGTGACAAGTGATTTCATGAAATGTAACTACTGTGCTGCTATGATTGAAATTCCTCCATCACAGATGAAAGTTATGCAGACAAAATCTACAGCAAAGTATGAGAATAAGATAAAGGAGCTCACTGCGCAGTGCGAGCTCAAGGCAAAAGAATGCTATGAGGCGTGGATGTCATTAACTGAAACAAGTAGGAAAATGGAAAAGGTCCAGATGGAGCTGGATCAAGTGACATTTAAGTCACTCACTACTGAACAAACTGTGGAGAAACAAGCCGAGAACCTGAGGAGTATTTCTAACAAGTACGAACTTGATAAGAAGAAATGGGCAGAAGCAATTACTAGTTTACAGGAACAAGTAAAGGTGATGAAGAGTGAACAATCTCGGCTTTCCCTTGAAGCACATGAGTGTGTTGATTCAATCCCTGAATTAAATGAGATGGTTTTTGCAGTTCAGGAATTGGTTAAGCAGTGTGAAGATCTCAAAGTGAAATACTATGAAGAGATGACACAGAGAAAGAAGCTCTTCAATGAAGTTCAAGAGGCTAAAGGGAACATTCGGGTTTTCTGCCGTTGTCGACCATTGAATAAGGGTGAAATGTCAGCTGGGTGTACAACAGTAGTGGATTTTGATGCATCAAAGGATGGATGCCTTGGAATTTTGACAACTGGCTCCACAAAAAAATTCAGATTTGACAGGGTTTATACACCAAAAGATGATCAAGTTGATGTTTTTGCTGATGCATCACCGATGGTAATCTCTGTGCTGGATGGCTACAACGTTTGCATCTTTGCTTACGGACAAACAGGAACAGGAAAAACATTTACCATGGAAGGAACCGAGCAGAATAGAGGAGTCAATTACAGGACTCTTGAGCACTTGTTTAGAGTTAGTAAGGAAAGGAGTGAAACATTTTCATACGACATATCTGTTAGCGTGCTTGAGGTTTATAATGAACAAATAAGAGATTTATTGGCTACTGGACCAACATCAAAAAGGTTGGAGATAAAACAAAACTCTGAAGGATATCATCATGTCCCTGGTGTTGTAGAAGCCAAGGTTGACAACATATGTGATGTGTGGAATGTACTGAAGGCTGGAAGCAATGCTAGAGCAGTTGGAAGTAATAACGTTAATGAGCACAGCAGTCGATCTCATTGCATGCTGTGTATAATGGTAAAGGCTAAAAATTTGATGAATGGCGAGTGTACCAAGAGCAAGCTTTGGCTTGTGGATTTGGCAGGTAGTGAGAGACTTGCAAAGACTGATGTGCAAGGGGAGCGACTTAAGGAAGCTCAAAATATCAATCGATCTCTTTCTGCTCTTGGAGATGTGATATCCTCTTTAGCAGCCAAAAGTAGTCACATTCCGTATAGGAACTCTAAATTGACACATTTACTCCAAGACTCACTCGGAGGTGACTCAAAAACTTTGATGTTTGTACAAATAAGTCCATCAGACCAGGATGTAGGTGAGACTCTGAGCTCACTTAATTTTGCAACTAGAGTGAGGGGCGTTGAGTTAGGTCCTGTTAAGAAGCAAATTGATACAAGTGAACTTCAAAAGACAAAAGCAATGCTTGACAAAGCACGGAGTGAGTGCAGAAGTAAAGACGAATCTATGAAAAAACTAGAAGAAAGTTTGCAAAACATTGAGAGTAAGGCCAAAGGAAAGGATCATGTCCACAAAAATCTACAAGAAAAGATTAAAGAACTTGAAGGCCAGATTGAGCTCAAAACATCCATGCAACATCAATCAGAGAAACAAATTTCTCAATTAAGTGAAAAGTTGAAGGGAAAAGAAGAAACCTGTTGTACTCTCCAACAAAAGGTCAAAGAGCTCGAGAGAAAAATAAAAGAACAGCTGCAGTCGGAGACAGCAAATTTCCAACAGAAGGTTTGGGATCTAGAGAAAAAGCTGAAAGATCAGTCGCAAGGGTCTGAGTCTGAATCTTCCTTTTTAAAAGATAAGATCAAGGAGCTTGAGAGAAAACTTAAAGAGCAAGAGCAGAACTCAGAAAGCTTGCTTAAACAACAGATGAAGGAACTAGAGGAGAAATACAAAGAGCGAGAGCAACAGTGGAAGCAAACTCATTGTTATGTTGAAGCCGTAAAGATGGCTGCCACACCTGAGATAGCTAAAAGCCGCACAAGTGATGAATGTCCAAACGAGATTGAGACTCGCATTTTATGTAGTTCAAACTCGGTAAACCGCCAAATAAGTCAAGACTCTGTTTTGGCAAAAGGGAATGATTCTACTCATCAGATGAGAAACAAAAGGCAGCACAGAAGCAACGAAATTGAGAACCATTATGTCATACCATCGTCCTCTTTACGCGATAGAAAAATTACAAGGAAATCTGATCCACCACCTAAAATTTTAAGGACCGGTAAGATAACATCAAAACCGACTGCCATTGCTAGTCAAGCTCCCGTGTCTCATAAGAGAGCTAGCACAAGCAGAGATCAGGCTCAAGGAGTTAAAGAGAGGGACAGTAAGAAGAAAATATGGTCAAGATAG 3156 0.4024 MDPIQLNDFQNDPQTLISDHHDSVMDDSNDSIFDSILCDSTSRLIPTGFTARYENPEECVMFVNAGGETFNEAAGGVKFLGDTFFDGGNVFRTNEPIVEGGDYPSIYQSARVGSFCYRIDNLSPGDYFVDLHFVEIINVNGPKGMRVFDVYIQEEKVLSELDIYAVVGVNKPLQMIDYRVTVKDDGVLVIRFESINGSPVVSGICIRRATTVSPVTSDFMKCNYCAAMIEIPPSQMKVMQTKSTAKYENKIKELTAQCELKAKECYEAWMSLTETSRKMEKVQMELDQVTFKSLTTEQTVEKQAENLRSISNKYELDKKKWAEAITSLQEQVKVMKSEQSRLSLEAHECVDSIPELNEMVFAVQELVKQCEDLKVKYYEEMTQRKKLFNEVQEAKGNIRVFCRCRPLNKGEMSAGCTTVVDFDASKDGCLGILTTGSTKKFRFDRVYTPKDDQVDVFADASPMVISVLDGYNVCIFAYGQTGTGKTFTMEGTEQNRGVNYRTLEHLFRVSKERSETFSYDISVSVLEVYNEQIRDLLATGPTSKRLEIKQNSEGYHHVPGVVEAKVDNICDVWNVLKAGSNARAVGSNNVNEHSSRSHCMLCIMVKAKNLMNGECTKSKLWLVDLAGSERLAKTDVQGERLKEAQNINRSLSALGDVISSLAAKSSHIPYRNSKLTHLLQDSLGGDSKTLMFVQISPSDQDVGETLSSLNFATRVRGVELGPVKKQIDTSELQKTKAMLDKARSECRSKDESMKKLEESLQNIESKAKGKDHVHKNLQEKIKELEGQIELKTSMQHQSEKQISQLSEKLKGKEETCCTLQQKVKELERKIKEQLQSETANFQQKVWDLEKKLKDQSQGSESESSFLKDKIKELERKLKEQEQNSESLLKQQMKELEEKYKEREQQWKQTHCYVEAVKMAATPEIAKSRTSDECPNEIETRILCSSNSVNRQISQDSVLAKGNDSTHQMRNKRQHRSNEIENHYVIPSSSLRDRKITRKSDPPPKILRTGKITSKPTAIASQAPVSHKRASTSRDQAQGVKERDSKKKIWSR* 1052
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1551 1051 MobiDBLite consensus disorder prediction 955 1051 - -
Tpr2g1551 1051 Pfam Malectin domain 61 204 IPR021720 -
Tpr2g1551 1051 Pfam Kinesin motor domain 403 717 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr2g1551 1051 Gene3D - 55 211 - -
Tpr2g1551 1051 Coils Coil 856 909 - -
Tpr2g1551 1051 Coils Coil 739 815 - -
Tpr2g1551 1051 SMART kinesin_4 395 726 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr2g1551 1051 MobiDBLite consensus disorder prediction 1033 1051 - -
Tpr2g1551 1051 Coils Coil 318 338 - -
Tpr2g1551 1051 Coils Coil 244 264 - -
Tpr2g1551 1051 Coils Coil 831 851 - -
Tpr2g1551 1051 PANTHER KINESIN-LIKE PROTEIN KIN-14R 27 1037 - -
Tpr2g1551 1051 ProSitePatterns Kinesin motor domain signature. 618 629 IPR019821 GO:0003777|GO:0005524|GO:0007018
Tpr2g1551 1051 ProSiteProfiles Kinesin motor domain profile. 397 718 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr2g1551 1051 MobiDBLite consensus disorder prediction 1013 1032 - -
Tpr2g1551 1051 Gene3D Kinesin motor domain 345 720 IPR036961 -
Tpr2g1551 1051 PRINTS Kinesin heavy chain signature 470 491 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr2g1551 1051 PRINTS Kinesin heavy chain signature 588 605 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr2g1551 1051 PRINTS Kinesin heavy chain signature 619 637 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr2g1551 1051 PRINTS Kinesin heavy chain signature 668 689 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr2g1551 1051 PANTHER KINESIN-LIKE PROTEIN KLP-3 27 1037 - -
Tpr2g1551 1051 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 355 718 IPR027417 -
Tpr2g1551 1051 MobiDBLite consensus disorder prediction 965 979 - -
Tpr2g1551 1051 CDD KISc_C_terminal 395 720 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1551 Tpr-Chr2 18283797 18289951 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g1551 345 771 Calmodulin-binding Proteins AT5G65930 40.460 1.33e-85 300