Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1549 ATGAAAAGGAAGTACCTGCTTTTGGGTGGGCAGCGAGAGACTCCTCAGGAATTCTCTCTCCCCTTCCACTTCTCTAGAAGGGTAAACGGAGATTTTGATATCACCATGAAGATACTCTATTGTGGGATTTGTCATGGAGACATTCATTTTGCCAAGAACGAGTTAGGCAGTCATAGCATCTATCCCATGGTTCCCGGACACGAGATAGTGGGTGAAGTGATAAAAATCGGTCCAAATGTCAAAAAATTCAAAATTGGTGACATAGCAGGAGTGGGTCCAATATGTGGGACATGTTCCAATTGCTCCAAGGGTTGGGAGAGTTACTGCCCCAAAACAATTGCAACATACAATGGACATGACTATGATGGATCAATAACCTATGGAGGATACTCAAATAAAATAGTTGTTAATGAAAATTATGCTATTATAATTCCAAAAGGGTTACCACTAGAAAGTGCAGCTCCATTGGTATGTGCTGGATTAACAGTTTATAGCCCAATGATGCATCATGGATTGTGTCAAAGTGGACAACATTTGGGTATTGTTGGATTAGGTGGACTTGGTCATGTTGCTGTTAAGTTTGCCAAGGCTTTTAACATGAAAGTTACTGTCATAAGTACTTCTCCTGGAAAGAAAGAGGAAGCTTTGGAAAGACTTGGTGCTGATTCTTTCTTGCTTATCAGTGATCAATAA 693 0.404 MKRKYLLLGGQRETPQEFSLPFHFSRRVNGDFDITMKILYCGICHGDIHFAKNELGSHSIYPMVPGHEIVGEVIKIGPNVKKFKIGDIAGVGPICGTCSNCSKGWESYCPKTIATYNGHDYDGSITYGGYSNKIVVNENYAIIIPKGLPLESAAPLVCAGLTVYSPMMHHGLCQSGQHLGIVGLGGLGHVAVKFAKAFNMKVTVISTSPGKKEEALERLGADSFLLISDQ* 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1549 230 Gene3D - 174 230 - -
Tpr2g1549 230 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 172 216 IPR006140 GO:0051287
Tpr2g1549 230 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 66 80 IPR002328 GO:0008270|GO:0016491
Tpr2g1549 230 Gene3D - 12 173 - -
Tpr2g1549 230 SUPERFAMILY GroES-like 24 177 IPR011032 -
Tpr2g1549 230 Pfam Alcohol dehydrogenase GroES-like domain 33 142 IPR013154 -
Tpr2g1549 230 PANTHER CINNAMYL ALCOHOL DEHYDROGENASE-LIKE PROTEIN 20 230 - -
Tpr2g1549 230 PANTHER ALDEHYDE REDUCTASE 20 230 - -
Tpr2g1549 230 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 151 229 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1549 Tpr-Chr2 18263014 18265277 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g1549 21 230 Monolignol Biosynthesis Gene Families AT4G37970 58.685 1.84e-77 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1549 - - aip:107621738 296.204