Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1539 ATGCCTAAAACATATTGTCTACTAATTAAATCAACTACTTTGGTACATCACAAAACTTTTAGGGAAACCGGTGAGAAAGATGTATCATTCAAGGTGTTGTATTGTGGGATATGTCACACTGATCTTCATATGATACACAATGATTGGGGCAATTCAATCTATCCATTAGTTCCAGGGCATGAACTTGTGGGTGTAGTAACTGAAGTGGGAAGCAAAGTAGAAAAGTTTAATGTTGGAGACAAAGTAGGTGTGGGATACATGGTTGATTCATGTCGCTCGTGCGAAAATTGTGACGACAATATTGAGAATTATTGTCCCCAACTTACAGTCACTTGTGGTGCCAAGTATCGCGATGGCACCGTTACATATGGAGGTTACTCCGACTCAATGGTTGCAGACGAGCACTTTGTTATCCTTATTCCTGATAACTTACCTCTTGATGTTGCCGGTCCTCTCCTTTGTGCTGGTGTTACAGTGTATAGTCCTCTTAGGAATTTTGGTATCGACAAGCCTGGTATGAATATAGGCGTTGTCGGTCTTGGTGGACTCGGTCATATGGCTGTGAAATTCGCCAAAGCTTTCGGTGCTAATGTAACAGTCATTAGTACATCGCCTAGCAAAGAAAAGGAAGCAATTGAACACTTAGGAGCTGACTCGTTTCTAATAAGTCGCGACCCAGATCAAATGCAGGCTGCAATGGGTACTTTGCATGGTATTATTGACACAGTTTCGGCGAGTCATCCTGTCTTACCGCTGATTGGTTTATTGAAAACTAATGGAAAGCTTGTAATGGTTGGTGGAGTATCAAAACCTCTAGAGCTTCCTGCATCTTCTTTACTTGGAGGGAGAAAGTTGATAGCCGGAAGTTTAATCGGAGGGATAAAAGAAACTCAAGAAATGATTGATTTTGCGGCAGAACACAATGTAAAGCCTGAGATTGAGATTGTTCCTATTGATTACGTCAACACGGCAATGGAGCGTCTTGCTAAAGCAGATGTGAAGTATCGTTTCGTGATTGATATTGGAAACTCACTGAAAGAAAGCGCTTAA 1050 0.4143 MPKTYCLLIKSTTLVHHKTFRETGEKDVSFKVLYCGICHTDLHMIHNDWGNSIYPLVPGHELVGVVTEVGSKVEKFNVGDKVGVGYMVDSCRSCENCDDNIENYCPQLTVTCGAKYRDGTVTYGGYSDSMVADEHFVILIPDNLPLDVAGPLLCAGVTVYSPLRNFGIDKPGMNIGVVGLGGLGHMAVKFAKAFGANVTVISTSPSKEKEAIEHLGADSFLISRDPDQMQAAMGTLHGIIDTVSASHPVLPLIGLLKTNGKLVMVGGVSKPLELPASSLLGGRKLIAGSLIGGIKETQEMIDFAAEHNVKPEIEIVPIDYVNTAMERLAKADVKYRFVIDIGNSLKESA* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1539 349 Pfam Alcohol dehydrogenase GroES-like domain 26 138 IPR013154 -
Tpr2g1539 349 Pfam Zinc-binding dehydrogenase 182 305 IPR013149 -
Tpr2g1539 349 Gene3D - 155 311 - -
Tpr2g1539 349 PANTHER ALDEHYDE REDUCTASE 19 348 - -
Tpr2g1539 349 SMART PKS_ER_names_mod 11 339 IPR020843 GO:0016491
Tpr2g1539 349 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 59 73 IPR002328 GO:0008270|GO:0016491
Tpr2g1539 349 PANTHER CINNAMYL ALCOHOL DEHYDROGENASE-LIKE PROTEIN 19 348 - -
Tpr2g1539 349 CDD CAD1 18 340 - -
Tpr2g1539 349 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 144 310 IPR036291 -
Tpr2g1539 349 SUPERFAMILY GroES-like 17 172 IPR011032 -
Tpr2g1539 349 Gene3D - 19 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1539 Tpr-Chr2 18185867 18187363 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g1539 19 346 Monolignol Biosynthesis Gene Families AT4G37990 68.598 5.24e-152 430
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1539 - K23232 gmx:100816901 550.436