Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1530 ATGGCACTCTCCAACTTAAAATCTAATAGAACAACTCTTTCTTCTCAACTCAATAAAATCTTCATTGCATTCCTCTTCCTTCAATACCACAATGTCAATTCACAATATTCACAATCACCAATACCATCACAACAACTGTCACCGTCAGAAATCTTTTCTTTTAGCATAACCGAATTCGATGAACAAAATCAAAATATATTTCTCGGTGGAGACGCCTCAACCTCGGGTGGCATTCTAAGACTAACAAAAACCGACGAATATGGTAAACCACTCCAAAACAGTGTTGGACGTGTAACACATTTCACACCGATTCACATTTGGGATAAAGCTAGTGGAGAATTAGCAGATTTCTCCGTTGGTTTCTCCTTTAACGTGAACACAAACGGTTCAAGACTCCATGGAGATGGATTTACTTTCTTTATAGGACCAGTTCATTTCGAGTTACCAAAAAATTCAAGTGGAGGGTATCTCGGTCTTTTCAACCCAGAAACGGCACATATTCCAGCTAAAAATCCAATAATAGCTATTGAATTTGATAGTTTTACAAATGGTTGGGACCCTGCTGCACCATCTCAATTTCCTCACATTGGAATTGATGTTGGTTCTATTGATTCGGTTGCGACCGTGAATTGGCCAATTGATTTTGTGCAAACAAATGCTTTAGGAGTAGCTAGTATAAACTATAATTCTGAGTCTAAGAAATTGAGTGTGTTTGTGGTTTACCCTGGGAGTGAGAGGGAGGGAATTAGTGTCTCTTCTATTGTTGATTTGAGGAGTGTTCTGCCTGAATGGGTTAGAGTTGGTTTCACTGCTTCCACAGGAGAGTTAGTTGAAACACATAATATTATCAATTGGTCATTTGAATCAGCTTTGTAA 876 0.3836 MALSNLKSNRTTLSSQLNKIFIAFLFLQYHNVNSQYSQSPIPSQQLSPSEIFSFSITEFDEQNQNIFLGGDASTSGGILRLTKTDEYGKPLQNSVGRVTHFTPIHIWDKASGELADFSVGFSFNVNTNGSRLHGDGFTFFIGPVHFELPKNSSGGYLGLFNPETAHIPAKNPIIAIEFDSFTNGWDPAAPSQFPHIGIDVGSIDSVATVNWPIDFVQTNALGVASINYNSESKKLSVFVVYPGSEREGISVSSIVDLRSVLPEWVRVGFTASTGELVETHNIINWSFESAL* 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1530 291 PIRSF Plant_L_lectin 25 291 IPR016363 GO:0030246
Tpr2g1530 291 CDD lectin_legume_LecRK_Arcelin_ConA 52 291 IPR001220 GO:0030246
Tpr2g1530 291 Pfam Legume lectin domain 53 289 IPR001220 GO:0030246
Tpr2g1530 291 Gene3D - 50 291 - -
Tpr2g1530 291 ProSitePatterns Legume lectins alpha-chain signature. 261 270 IPR000985 -
Tpr2g1530 291 PANTHER LECTIN 1 291 - -
Tpr2g1530 291 PANTHER CONCANAVALIN A-LIKE LECTIN FAMILY PROTEIN 1 291 - -
Tpr2g1530 291 SUPERFAMILY Concanavalin A-like lectins/glucanases 51 290 IPR013320 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1530 Tpr-Chr2 18095004 18095879 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g1530 54 291 Receptor kinase-like Gene Family AT5G10530 34.156 1.03e-30 119
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g1530 2 18095004 18095879 Tpr4g1887 4 19874665 19879090 PCT