Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1520 ATGATGGAGCTACAAGTTATTTGGTTAATAAGATTGGTTGTGGCATGTGTTCTTTGTCTGTGTATATTTATCAGATCAGCTTCTTCTGCAACTGAAGGATTTAAGAGCATAGCATGCTGTGCTGATTCAGATTACACAGATCCATTGACAACCTTAAATTATACAACAGATTTTCATTGGTACTCTGATAAAAGAGGTTGCAGACAAATACCTGATATTGTGTTGAGCCACAGAAGCAATGAAAACGTTCGACTGTTCGATATAGATGAAGGAAAGAGATGTTACAAATTGTCAACAATTAAGGATCAAGTATATCTGATAAGGGGAATCTTTCCATTTGATAGTTCAAATTCTTCGTTTTATGTTTCAATTGGGGTAACAGAACTAGGCGAAGTAAGATCGTCTAGGCTTCAAGACTTTGAAATTGAGGGAGTTTTCAAAGCTACCAAAGACTACATAGATTTTTGCGTATTGAAGGAGGAGGTCAATCCCTTTATTTCTCAGCTTGAATTAAGGCCATTACCTGAAGAATACCTACATGATTTCGGTACCAGTGTTTTAAAACTGATAAGCAGAAATAATCTTTGCGGCACAAAAGATGAAATCAGGTTCCCAGTTGACCAAAACGATAGAATCTGGAAAGCAACATCAACTCCATCATCTTCCCTTCCACTGTCTTCCAATATCAGCAATGTCGACCTCAAAGGCAGTGTGACACCTCCTTTAGAAGTCCTACAAACAGCTGTTACTCACCCTGAGCAATTGGTGTTCATCCATGATGACCTTGAGACCGATGATTATGAATACTCTGTGTTTCTCTTCTTCCATGAGTTAAATAGCACTCTCAAAGCAGGAGAAAGGGTGTTTGACATCTATCTAAACAGTGAGATTAAAAAGGCGGGTTTTGATGTACTGGAAGGAGGATCCAAGTACAATTACACTGTCTTGAACATTTCAGCAAATGGATCACTCAATATAACCATAGTCAAAGCATCTGGATCTAAGTTTGGACCCCTTTTGAATGCCTATGAGATCCTGCAGGCGCGACCATGGATCGACGAGACCAACCAAACAGATTTGGTAATTATTCAGAAGATGAGAGAAGAATTGCTGCTGCAAAACAAAGACAATGAAGCATTGGGGAGTTGGAGTGGAGACCCTTGTAAGCTTTTCCCATGGAAGGGAATAGAATGTGACGGTTCAAATGATTCATCTGTTATCACTAAGCTGGATCTTTCCTCCAATAATCTCAAAGGAACAATTCCCTCCAGTGTCACTAAGATGAACAATTTACAAATACTGAACCTGAGCCACAACCATTTTGATGGTTATATCCCGTCGTTTCCGCCGTCCTCCTTGCTGATATCAGTAGATCTGAGCTACAATGACCTTATGGGACAGCTTCCAGAATCCATTATCTCACTGCCACATTTAAAATCATTATATTTTGGCTGCAATCAACACATGAGCGATGAGGATCAAACCAAATTGAACATTTCACTAATCAATACAGATTATGGGAGATGCAAAGCAAAAAAACCGAAATTTGGACAAGTTTTCGTGATTGGAGCTATTACAAGTGGATCAGTTTTGATTACTTTGGCTGCTGTTGGAATTCTCTTTGTTTGCCATTATAGACACAAGTCAATTCCTTTGGAAGGATTTGGTGGAAAGAACTACCCAATCAATATAATTTTCTCATTGCCAAGCAAAGACGATTTCTTCATAAAGTCTGTATCAGTTAAACCATTCACTTTGGAGTATATAGAGCTGGCTACAGAAAACTACAAAACTTTGATAGGTGAAGGAGGATTTGGCTCTGTTTACCGAGGCACTTTAGACGATGGTCAAGAAGTGGCAGTGAAAGTCCGGTCGGCAACATCAACTCAGGGAACCCGAGAATTCGATAACGAGCTAAACCTACTTTCAGCTATACAACATGAGAACTTGGTGCCTCTTCTTGGTTACTGTAATGAGTATGATCAACAAATTCTCGTGTATCCTTTCATGTCCAATGGCTCTTTGCTAGATAGACTATATGGGGAACCAGCAAAAAGAAAAATATTAGACTGGCCAACTAGACTCTCTATTGCTCTAGGTGCAGCTCGAGGTTTGGCATATCTTCACACATTTCCTGGACGCTCTGTAATACACAGGGACGTAAAATCAAGCAATATACTGCTTGATCATAGCATGTGTGCTAAGGTTGCAGATTTTGGTTTTTCAAAATATGCTCCTCAGGAAGGAGACAGTTATGTTTCCCTTGAAGTAAGAGGAACAGCAGGATATCTGGATCCTGAGTACTACAAAACCCAGCAATTATCTGAAAAGAGTGATGTTTACAGCTTTGGCGTGGTTCTACTTGAAATTGTAAGTGGACGGGAACCTCTCAACATAAAGAGACCACGGATTGAGTGGAGCTTGGTGGAATGGGCTAAACCATACATAAGAGCATCAAAGGTGGATGAAATTGTAGATCCTGGCATCAAGGGAGGATATCATGCAGAGGCACTGTGGAGAGTGGTGGAAGTAGCACTGCAATGTCTTGAACCCTACTCAACATATAGGCCATGCATGGTTGACATTGTCCGCGAGTTGGAGGATGCTCTCATTATCGAAAACAATGCATCTGAATACATGAAGTCCATTGACAGCCTCGGAGGATCCAACCGCTACTCAATTGTCATGGACAAAAGGGCACTGCCCTCAACTACATCTACAGCAGAATCAACCATCACAACCCAAACCTTATCACACCCTCAACCGAGATAG 2772 0.4058 MMELQVIWLIRLVVACVLCLCIFIRSASSATEGFKSIACCADSDYTDPLTTLNYTTDFHWYSDKRGCRQIPDIVLSHRSNENVRLFDIDEGKRCYKLSTIKDQVYLIRGIFPFDSSNSSFYVSIGVTELGEVRSSRLQDFEIEGVFKATKDYIDFCVLKEEVNPFISQLELRPLPEEYLHDFGTSVLKLISRNNLCGTKDEIRFPVDQNDRIWKATSTPSSSLPLSSNISNVDLKGSVTPPLEVLQTAVTHPEQLVFIHDDLETDDYEYSVFLFFHELNSTLKAGERVFDIYLNSEIKKAGFDVLEGGSKYNYTVLNISANGSLNITIVKASGSKFGPLLNAYEILQARPWIDETNQTDLVIIQKMREELLLQNKDNEALGSWSGDPCKLFPWKGIECDGSNDSSVITKLDLSSNNLKGTIPSSVTKMNNLQILNLSHNHFDGYIPSFPPSSLLISVDLSYNDLMGQLPESIISLPHLKSLYFGCNQHMSDEDQTKLNISLINTDYGRCKAKKPKFGQVFVIGAITSGSVLITLAAVGILFVCHYRHKSIPLEGFGGKNYPINIIFSLPSKDDFFIKSVSVKPFTLEYIELATENYKTLIGEGGFGSVYRGTLDDGQEVAVKVRSATSTQGTREFDNELNLLSAIQHENLVPLLGYCNEYDQQILVYPFMSNGSLLDRLYGEPAKRKILDWPTRLSIALGAARGLAYLHTFPGRSVIHRDVKSSNILLDHSMCAKVADFGFSKYAPQEGDSYVSLEVRGTAGYLDPEYYKTQQLSEKSDVYSFGVVLLEIVSGREPLNIKRPRIEWSLVEWAKPYIRASKVDEIVDPGIKGGYHAEALWRVVEVALQCLEPYSTYRPCMVDIVRELEDALIIENNASEYMKSIDSLGGSNRYSIVMDKRALPSTTSTAESTITTQTLSHPQPR* 924
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1520 923 Gene3D Ribonuclease Inhibitor 359 504 IPR032675 -
Tpr2g1520 923 SUPERFAMILY L domain-like 382 489 - -
Tpr2g1520 923 CDD STKc_IRAK 600 867 - -
Tpr2g1520 923 Pfam Protein tyrosine and serine/threonine kinase 597 866 IPR001245 GO:0004672|GO:0006468
Tpr2g1520 923 SMART serkin_6 594 871 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g1520 923 Pfam Malectin-like domain 42 346 IPR024788 -
Tpr2g1520 923 Gene3D Transferase(Phosphotransferase) domain 1 670 886 - -
Tpr2g1520 923 ProSitePatterns Protein kinases ATP-binding region signature. 600 622 IPR017441 GO:0005524
Tpr2g1520 923 ProSitePatterns Serine/Threonine protein kinases active-site signature. 716 728 IPR008271 GO:0004672|GO:0006468
Tpr2g1520 923 Gene3D - 192 349 - -
Tpr2g1520 923 SUPERFAMILY Protein kinase-like (PK-like) 574 866 IPR011009 -
Tpr2g1520 923 ProSiteProfiles Protein kinase domain profile. 594 871 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g1520 923 Gene3D Phosphorylase Kinase; domain 1 566 669 - -
Tpr2g1520 923 PANTHER OS07G0107800 PROTEIN-RELATED 78 884 - -
Tpr2g1520 923 PANTHER OS05G0525400 PROTEIN 78 884 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1520 Tpr-Chr2 18000787 18008011 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g1520 9 873 Receptor kinase-like Gene Family AT1G67720 33.630 3.02e-134 424
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Tpr2g1520 Malectin_like 1.9e-42 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1520 - - gmx:100781986 1466.06