Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1519 ATGAACAAACAACCTACAAAAAGTCATGAAACAGTGATTGACATAAAACATAAGCCTGTGAGTTTCACTGGAGGACTTGAATTTGAATCTCTTACTTACACAGTCATAAAGAAGAAGAAAATCGATGGAAATTGGTCGAACGAAGACGTTGATTTGTTGCATGATATAACTGGTTATGCACCAAAGGGTAGTATCACTGCAGTTATGGGACCAAGTGGTGCTGGAAAATCAACTTTGTTGGATGGACTTGCTGGAAGAATTGCAAGTGGAAGTCTTAAAGGGAAAGTTTCATTGGATGGAAATAGTGTGAATGCCAGTTTGATTAAAAGAACTTCTGCTTATATTATGCAAGAAGATAGGCTTTTTCCTATGCTTACTGTTTATGAGACTTTGATGTTTGCTGCTGACTTCAGATTAGGGCCACTTTCAGTTGTTGATAAGATGCAGAGAGTTGAGAAGCTTATTGAACAGCTTGGATTATCTTATTCTAGGAACACCTACATAGGAGATGAAGGAACAAGAGGAATCTCCGGCGGAGAACGTCGCAGAGTCTCAATCGGGGTAGATATAATCCATGGACCTTCACTCCTTTTCCTAGACGAACCAACTTCAGGACTAGACTCAACAAGTGCTCTTAGTGTGATTGAAAAAGTACATGACATAGCAAGAAATGGTAGCACAGTTATTCTCACAATCCACCAACCTTCATCAAGAATTCAGCTTCTCCTTGACCATCTCATCATCCTTGCTAGAGGACAACTCATGTTTCAAGGATCATTTAAAGATGTAACTCCCCATTTGAACCGAATGGGACGAAAAGTACCTAAAGGAGAGAATCCAATTGAGAATCTCATTGATGTGATACAAGAGTATGATCAGTGTGATGTTGTTGGTGTTGAGGTGTTAGCTGAGTTTGCAAAAACAGGAATGAAACCACCTCTTTTGAGTGACATGGAGGAAATTTCGATGTCGAATTCTGTTGCACCTTCTCCTATGCATAGAGGATCTAGATTTGAGGAAAAATCTCAAGACTTTTCTATGTCATCACAAGTTAGTAGAAGGAGTTTGAATGATGAGTTTGATCATAGTATTAGAAGTCCATATAATAACACACCAATGTCATGGAGTGCTAGCAACAGTGCAGCTTTCTTGAAATTCACACCCTCAAGACTTAAAAATGAGCAAAAGGCGCAGAAGCCTGCAAGTCAAGCTTCCCCCGGCTACTACACATACTCAAGTGAAATCCTTCCAGCAACACCAACACCACATAGCAGTGACTACATAGTCGATGAGAGTGACTACCTCACCCCAGCAAATGGCACACCAGAACATCTAGGCCCAAAGTTTTCAAATTCGTACATAGGAGAGACATGGATCCTAATGCGCCGCAACTTCATAAACATACGGAGAACCCCCGAGCTTTTTCTATCAAGACTAATGGTCCTCACCTTCATGGGAATCATGATGGCCACAATGTTCAAAAATCCAAAAGACACCTTACAAGGAATCACGAACCGTCTCAGCTTCTTTATCTTCACAGTATGTCTCTTTTTCTTCTCTTCCAATGACGCCGTCCCTGCCTTCATCCAAGAGAGGTTCATTTTCATCCGCGAAACTTCGCACAATGCTTATAGAGCTTCAACTTACACCCTAGCCAGCTTAATCACTCACATGCCATTTCTTGCACTCCAAGCTTTAACTTATGCAGGCATTGTTTGGTTTGCTTTACAACTTAGAGGCCCTTTTCTATACTTCTTCCTTGTTCTCTTCATTTCTCTTCTTTCCACAAATTCGTTTGTTGTGTTTGTGAGTTCTGTGGTTCCAAACTACATCTTGGGCTATGCTGCTGTCATTGCCTTCACTGCATTGTTCTTCTTGTTCTGTGGATACTTCTTGAGCAGCGAGGATATTCCGAAATATTGGCGTTGGATGAATAAGATTTCGACAATGACATATCCTTATGAAGGACTATTGATGAACGAGTATCAAACGCATGATATTTTTGGGAATAATGATGGTGTACCTGTTACTGGTTTTGATATCTTGCATAGTCTTCATATTGGTATTGATGAGGTTAAGAAGAGGAACAATGTGCTTATAATGTTAGGTTGGGCTGTTCTATATAGGATTTTATTTTACATTATTCTTCGTTTTGCATCGAAAAATCAAAGGTCCTAG 2178 0.4008 MNKQPTKSHETVIDIKHKPVSFTGGLEFESLTYTVIKKKKIDGNWSNEDVDLLHDITGYAPKGSITAVMGPSGAGKSTLLDGLAGRIASGSLKGKVSLDGNSVNASLIKRTSAYIMQEDRLFPMLTVYETLMFAADFRLGPLSVVDKMQRVEKLIEQLGLSYSRNTYIGDEGTRGISGGERRRVSIGVDIIHGPSLLFLDEPTSGLDSTSALSVIEKVHDIARNGSTVILTIHQPSSRIQLLLDHLIILARGQLMFQGSFKDVTPHLNRMGRKVPKGENPIENLIDVIQEYDQCDVVGVEVLAEFAKTGMKPPLLSDMEEISMSNSVAPSPMHRGSRFEEKSQDFSMSSQVSRRSLNDEFDHSIRSPYNNTPMSWSASNSAAFLKFTPSRLKNEQKAQKPASQASPGYYTYSSEILPATPTPHSSDYIVDESDYLTPANGTPEHLGPKFSNSYIGETWILMRRNFINIRRTPELFLSRLMVLTFMGIMMATMFKNPKDTLQGITNRLSFFIFTVCLFFFSSNDAVPAFIQERFIFIRETSHNAYRASTYTLASLITHMPFLALQALTYAGIVWFALQLRGPFLYFFLVLFISLLSTNSFVVFVSSVVPNYILGYAAVIAFTALFFLFCGYFLSSEDIPKYWRWMNKISTMTYPYEGLLMNEYQTHDIFGNNDGVPVTGFDILHSLHIGIDEVKKRNNVLIMLGWAVLYRILFYIILRFASKNQRS* 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1519 725 Pfam ABC-2 type transporter 457 662 IPR013525 GO:0016020|GO:0140359
Tpr2g1519 725 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 48 271 IPR027417 -
Tpr2g1519 725 SMART AAA_5 62 260 IPR003593 -
Tpr2g1519 725 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 26 276 IPR003439 GO:0005524
Tpr2g1519 725 Gene3D - 27 272 IPR027417 -
Tpr2g1519 725 Pfam ABC-2 type transporter 233 290 IPR043926 GO:0140359
Tpr2g1519 725 PANTHER ABC TRANSPORTER G FAMILY MEMBER 19 7 719 - -
Tpr2g1519 725 MobiDBLite consensus disorder prediction 327 357 - -
Tpr2g1519 725 CDD ABCG_EPDR 26 258 - -
Tpr2g1519 725 Pfam ABC transporter 53 204 IPR003439 GO:0005524
Tpr2g1519 725 ProSitePatterns ABC transporters family signature. 176 190 IPR017871 GO:0005524
Tpr2g1519 725 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 7 719 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1519 Tpr-Chr2 17992432 17996716 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g1519 15 348 Calmodulin-binding Proteins AT2G36910 25.723 6.38e-14 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1519 K05681 - gmx:100804809 1145.95