Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1511 ATGTCTCTGGCAGCGGTGGTTATGGAGGAGGAAGGGCGGAGTAAACTGGTTTCTCAGAATGGTGTCGTTGATTTGAAAGAACGGAATTACTTGGGAGTGTCTGACTGTTCATCAGTGGATAGTTGTGATTCAAATCTCCCGAGCTTGTGTGATGAGAAAAAGGTGAACTTGAATTTGAAAGCTACTGAGTTGAGGTTGGGTCTTCCTGGATCTCAATCACCTGAAAGGGATTTGGATTTTTATTCGACAAAGCTTGATGAGAAGCCGTTGTTCCCTTTGCTTCCTGCAAAAGATGGAATCCAGAAGAATGTGGTTTCGGGCAACAAGAGAGGATTTGCTGATACTGTTGATGGGTTTTCTCAGGGGAAGTTTAATGGTAATACTGGGATTAATGTGATGCTTTCGCCTAGACCTGTTGTAGCTCAGCCAAACACAGTGAAAGAAATGCCCAGTAAGGCGTTGCAGGAAAGGCCTTGTGCAGCTAGAGGAACTACTGGTCATAATCATGCAGGTGCTGCTTCTATTGCTGGCTCTCAGCCAGCATCTAAGGCTCAAGTTGTTGGTTGGCCTCCTATAAGATCATTTAGGAAAAACTCCATGGCCACCGCTTCCAAGAACAACAACGATGAAGTGGATGGAAAACCAGGTCCCACTGCACTCTTTGTGAAGGTTAGCATGGACGGTGCTCCCTATCTTAGGAAGGTGGATCTAAGAACTTATACAACATATCAGGAACTATCTTCTGCCCTTGAGAAGATGTTCAGCTGTTTTACCCTAGGCCAGTGTGGTTCCCATGGAGCTCCAGGAAGAGAAATGATGAGTGAGAGCAAGCTAAGGGACTTTTTGCATGGTTCAGAATATGTTCTCACCTATGAAGATAAAGATGGAGACTGGATGCTTGTAGGGGATGTACCATGGGAGATGTTCATTGATACTTGCAGAAGACTGAAAATCATGAAGGGTTCTGATGCCATTGGCTTAGCTCCCAGGGCAATGGAAAAGTCCAAAAGCAGGAGTTAG 1020 0.452 MSLAAVVMEEEGRSKLVSQNGVVDLKERNYLGVSDCSSVDSCDSNLPSLCDEKKVNLNLKATELRLGLPGSQSPERDLDFYSTKLDEKPLFPLLPAKDGIQKNVVSGNKRGFADTVDGFSQGKFNGNTGINVMLSPRPVVAQPNTVKEMPSKALQERPCAARGTTGHNHAGAASIAGSQPASKAQVVGWPPIRSFRKNSMATASKNNNDEVDGKPGPTALFVKVSMDGAPYLRKVDLRTYTTYQELSSALEKMFSCFTLGQCGSHGAPGREMMSESKLRDFLHGSEYVLTYEDKDGDWMLVGDVPWEMFIDTCRRLKIMKGSDAIGLAPRAMEKSKSRS* 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1511 339 SUPERFAMILY CAD & PB1 domains 217 320 - -
Tpr2g1511 339 Pfam AUX/IAA family 62 330 IPR033389 -
Tpr2g1511 339 PANTHER AUXIN-INDUCED PROTEIN 16 332 - -
Tpr2g1511 339 Gene3D - 216 333 - -
Tpr2g1511 339 ProSiteProfiles PB1 domain profile. 219 323 IPR000270 GO:0005515
Tpr2g1511 339 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 16 332 IPR003311 GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1511 Tpr-Chr2 17874405 17879304 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g1511 221 324 B3 DNA Binding Superfamily AT5G37020 31.731 1.47e-07 51.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Tpr2g1511 AUX_IAA 2.5e-90 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1511 K14484 - gmx:547502 535.028
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g1511 2 17874405 17879304 Tpr4g4676 4 55032135 55037143 PCT