Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1508 ATGACATATGTATTTCTCTTTTCCCAAATTTTTTTCATTTGTAATGTTTTTTTCTCTCTCTTCTCTCCCCCTCTCTCTCGTACCTCTCTCTTTTCTCACCATCACTTTCATCTCTCCTCCCTGCCTCATCTCCTCCTCCACCACCGCATCCACCACAACCTCCACCACCACCTACAAATCGATCTCCGAATCAGAACGTCCTCTCCGCTTCCGGTGATGCCGCCGTCATCAGAATCACGTTATTCTTCCTCTCAGATTTACAAACCCAGCAACTACAAAGAGATCGATGAAGATTTGGAATTAAGGTATCCTCATAAAGGAATGTTTAAAGAGCTTCTCAAAAAGCAAGGTTCACAAAATTACGGTTTGATTGTAATTCAATTTTATCAGAAAACTTGGGTTTGTTTTGATTATCAGAAAATGGAATATAGTGTTTCAGAAATCAATTATCAGAGATTGTTGTTCATGAATTTGAAGAAAAAGAAAATGGTTGATGGTGGCAAGGTTCAATTTTGGGGTTGCCTTTGCTTTGCAAGAATGGACCCAACTCTGTTTTGCCAAGAGTTGGTTACTATGTGTCAAGCCAATGGACTGATTTTCAACCGAGATCCTGTGGTACCTCTTTCCCAAAGCAATCCTACTCATATTGAGAGAGAGCTTGAGAATTTTAACAAGAAGTGCAAGGCAATACTTGAAAGCAAACAGCAGATGCTTCAATTGCTGATAATAATTATGCCTGATTTCAAGGTTGTGAGGACTTATGATAAAATAAAGCGTGTCTGTGAAACTGAACTGGGAATTGTTTCTCAATATTGTCAGCCAAGGCAAGCGCAAAAGTTGAATAAGCAGTATCTTGAAAATCTGGCTTTGAAGATTAATGTCAAGGTTGGTGGTCGTAACACTCTGCTGAATGATGCATTTGAGAGAAGAATTCCACTTGTAATTGCTAATTGGTCAATGTGA 963 0.3915 MTYVFLFSQIFFICNVFFSLFSPPLSRTSLFSHHHFHLSSLPHLLLHHRIHHNLHHHLQIDLRIRTSSPLPVMPPSSESRYSSSQIYKPSNYKEIDEDLELRYPHKGMFKELLKKQGSQNYGLIVIQFYQKTWVCFDYQKMEYSVSEINYQRLLFMNLKKKKMVDGGKVQFWGCLCFARMDPTLFCQELVTMCQANGLIFNRDPVVPLSQSNPTHIERELENFNKKCKAILESKQQMLQLLIIIMPDFKVVRTYDKIKRVCETELGIVSQYCQPRQAQKLNKQYLENLALKINVKVGGRNTLLNDAFERRIPLVIANWSM* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1508 320 Pfam Piwi domain 241 306 IPR003165 GO:0003676
Tpr2g1508 320 SUPERFAMILY Ribonuclease H-like 151 308 IPR012337 -
Tpr2g1508 320 PANTHER PROTEIN ARGONAUTE 1C 156 315 - -
Tpr2g1508 320 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 156 315 - -
Tpr2g1508 320 Gene3D - 160 308 - -
Tpr2g1508 320 ProSiteProfiles Piwi domain profile. 240 320 IPR003165 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1508 Tpr-Chr2 17830851 17837876 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g1508 157 314 Eukaryotic Initiation Factors Gene Family AT1G48410 46.914 1.41e-38 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1508 K11593 - qsu:112035484 179.874