Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1497 ATGAATCTTTGGAGCGACGACAACTCATCAGTAATGGAGGCTTTCATGACCTCCTCTGATTTATCCACCTTATGGCCATCACAACCACCGCCGTCGTCACAACCACCACAAACCACCACCGGATTCAACCAAGACACACTTCAACAACGTCTTCAAGCTTTAATCGAAGGCTCTTCTGAAATCTGGACTTACGCTATCTTCTGGCAACCGTCTTACGACTATTCCGGCTCTTCTCTTCTCGGTTGGGGTGACGGTTATTACAAAGGCGAAGAAGATAAATCAAAATCAAAATCAAAATCTAAAGCTACTTCACCTGCTGAACAAGAACACCGTAGAAAAGTTCTTCGAGAACTTAATTCTTTAATCTCCGGTAATCCGGTACCGGAAGAAACTTCCGTTGATGAAGAAGTTACTGATACGGAGTGGTTTTTTTTAGTTTCTATGACTCAATCTTTTGTTAACGGAAGTGGACTTCCTGGACAAGCTTATTTTAATTCAACTCCGGTGTGGTTAACCGGAGGTGAGAATCTCGCCCTCTCGGTTTGCGAGAGGGCGAGACAAGGTCAGGAACATGGTTTACAGACGCTGGCGTGTATACCGTCGGCGCACGGTGTTTTAGAGCTTGGATCTACTGAATTGATTTATCAGAATAACGATCTGATGAATAAAGTTAAGATGTTGTTTAATTTTAATAATAATTTTGATTTTGGATCTTCTTGGCAATTAGGTAGTAATAATTCTACTGTAATTACTCATCAAGGTGAAAATGATCCTTCTTCAATTTGGCTTAATGATCCTGAAACTAGAGATTCTGTTGTTGATAATAATTCTCTTGCTGCAACAACAACAACAACAACAGCAACAACAAACACTTCAGTTTCAATTCCAAGTCATCATCAGCAACATCAACAGCATCAGAACAATAGCAATAATCAGAGTTTGAGTGTGAGTGTGACGAAGACGATTCAATTTGAAACTCATGGTTCAAGTACTGTAACAGAAGTTCCTAGTGTTGTTCATGTTTCAAGTAAGCAGAATCAACAAGGATTGTTTACTAAGGAAATGAATCTTTCGGAATACGGTGGGAGTAACGGTCAGCAGCGTTCATTGAAGCCGGAATCGGGGGAGATTTTGAGTTTTGGTGGTGAGAGTAAAAAGAGTTCATATGTTGCTAATAATGGAAATTCGAATTCGAATTTTTTCTCGGGTCAATCACAGTTAGTTTCAGTTGCTGAGGAGAATGGGAATGGGAACGGAAATGGAAACGGGAAGAGGAGGTCTCCGAATTCGAGAGGAAGTAATAATGATGATGGAATGCTATCTTTTACTTCGGGTGTAATTGTTCCGCCGGTGAATTTGAAATTCTCTGGTGTTACTGGTGGTGGTGATTCGGACCATTCGGATCTGGAAGCTTCGGTGGTGAAGGAGATGGATAGTAGTCGTGTGGTGGAGCCGGAGAAGAGGCCGAGGAAGAGAGGGAGGAAGCCGGCGAATGGAAGAGAGGAACCGTTGAATCATGTTGAAGCTGAGAGGCAAAGAAGAGAGAAGCTGAATCAGAGATTTTATGCTCTTCGTGCAGTTGTTCCTAATGTTTCAAAGATGGATAAAGCTTCACTTTTGGGTGATGCTATATCTTACATTACTGAGTTGAAAACAAAGCTTGTGAAAACTGAATCTGATAAAGATGAATTGGAAAAGCAACTTGATTCAGTGAAGAGTGAGTTTCAGAAAGTCAATGAAAACTCGTCTCAGCCACCACCACAACCTCAACAACAACAAGTACCCGATAAACCCTCTTCCAATCAAGCTTTAATCGATTTAGATATTGACGTGAAGATTATAGGTTGGGATGCAATGATAAGGGTCCAATGCAGTAAGAAAAACCACCCTGCAGCGAAGTTGATGGCGGCGTTGATGGAGCTTGACCTAGAAGTGCACCACGCGAGTGTTTCCGTGGTGAATGATTTGATGATACAACAAGCAACCGTGAAGATGGGGAGTCGTTTTTACACGCAGGAACAGCTTCGGGCAGCATTGTCCTCTAAAGTCGGGGATGTTCAATAA 2064 0.4196 MNLWSDDNSSVMEAFMTSSDLSTLWPSQPPPSSQPPQTTTGFNQDTLQQRLQALIEGSSEIWTYAIFWQPSYDYSGSSLLGWGDGYYKGEEDKSKSKSKSKATSPAEQEHRRKVLRELNSLISGNPVPEETSVDEEVTDTEWFFLVSMTQSFVNGSGLPGQAYFNSTPVWLTGGENLALSVCERARQGQEHGLQTLACIPSAHGVLELGSTELIYQNNDLMNKVKMLFNFNNNFDFGSSWQLGSNNSTVITHQGENDPSSIWLNDPETRDSVVDNNSLAATTTTTTATTNTSVSIPSHHQQHQQHQNNSNNQSLSVSVTKTIQFETHGSSTVTEVPSVVHVSSKQNQQGLFTKEMNLSEYGGSNGQQRSLKPESGEILSFGGESKKSSYVANNGNSNSNFFSGQSQLVSVAEENGNGNGNGNGKRRSPNSRGSNNDDGMLSFTSGVIVPPVNLKFSGVTGGGDSDHSDLEASVVKEMDSSRVVEPEKRPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYITELKTKLVKTESDKDELEKQLDSVKSEFQKVNENSSQPPPQPQQQQVPDKPSSNQALIDLDIDVKIIGWDAMIRVQCSKKNHPAAKLMAALMELDLEVHHASVSVVNDLMIQQATVKMGSRFYTQEQLRAALSSKVGDVQ* 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1497 687 PANTHER MYC 38 684 IPR045084 GO:0003700|GO:0006355
Tpr2g1497 687 PANTHER TRANSCRIPTION FACTOR MYC2 38 684 - -
Tpr2g1497 687 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 502 571 IPR036638 GO:0046983
Tpr2g1497 687 Coils Coil 547 581 - -
Tpr2g1497 687 MobiDBLite consensus disorder prediction 20 39 - -
Tpr2g1497 687 MobiDBLite consensus disorder prediction 468 511 - -
Tpr2g1497 687 MobiDBLite consensus disorder prediction 91 110 - -
Tpr2g1497 687 SMART finulus 507 556 IPR011598 GO:0046983
Tpr2g1497 687 CDD bHLH_AtAIB_like 498 574 - -
Tpr2g1497 687 MobiDBLite consensus disorder prediction 459 511 - -
Tpr2g1497 687 Gene3D - 493 582 IPR036638 GO:0046983
Tpr2g1497 687 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 501 550 IPR011598 GO:0046983
Tpr2g1497 687 Pfam Helix-loop-helix DNA-binding domain 505 550 IPR011598 GO:0046983
Tpr2g1497 687 MobiDBLite consensus disorder prediction 575 599 - -
Tpr2g1497 687 MobiDBLite consensus disorder prediction 416 435 - -
Tpr2g1497 687 MobiDBLite consensus disorder prediction 282 314 - -
Tpr2g1497 687 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 47 228 IPR025610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1497 Tpr-Chr2 17694972 17697721 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g1497 1 684 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G32640 52.321 0.0 635
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Tpr2g1497 bHLH-MYC_N 8.2e-55 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1497 K13422 - gmx:100790168 800.816
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g1497 2 17694972 17697721 Tpr2g1497 2 17694972 17697721 ECH