Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1487 ATGGCACCTTCTTTTGACATAACAAGTCATACAGTTTGTGTCATGGATGCTTCTGGCCAATTAGGCTTTAGCCTTGTTCAAAGACTCCTTCAAAGAGGTTACACAGTTCATGCCTCCGTTCAAAAATATGAGGAAGATCTATTCAATGGAATTTCAGTTAATTCAGATAAACTCAAGATTTTTGAATCAGACCCTTTTGATTATCATAGCATAATTGATGCTCTTAGAGGCTGTTCTGGTTTGTTCTACTCATTTGAACCTCCTCTTGATCAACCCAATTATGATGAATATATGGCTGACGTGGAAGTTAGAGCAGCACACAACGTGCTTGAAGCTTGTGCTCAAACAGAAACTATTGATAAAGTTGTTTTCACATCTTCAGCAACTGCTGTTGTTTGGAGGGAGGATCGTAAAACCATTGAACCTGAAATTGATGAAATTCATTGGAGTGATGTCAATTTCTGTCGCAAATTTAAGCTATGGCATGGGATGTCAAAGACATTATCAGAGAAAACAGCGTGGGCCTTAGCAATGGACAGAGGTGTGAATATGGTGTCAATAAACGCTGGACTATTGATGACTCATGATCTTACCATCAAACACCCTTACTTGAGAGGTGCTGCTGAAATGTACGAGGATGGTGTCTTTGTGACCGTTGATTTAGGATTCTTGGTGGATACCCATATTTGTGTATACGAGGATGTTTCATCGTTCGGTCGTTATTTGTGCTTCAATCATATTATTAATACTCAAGACGACGCCGTTCAACTTGCACAAAAATTAGCTCCTACCGCATCTTCTTCCTTACCCCAAAGTGATGATTATGGTAAAATTTTCATTGAACAAAAAATAAGCAACAAGAAGGTGAACAAATTGATGGTGGACTTTGAGGCTTAA 897 0.388 MAPSFDITSHTVCVMDASGQLGFSLVQRLLQRGYTVHASVQKYEEDLFNGISVNSDKLKIFESDPFDYHSIIDALRGCSGLFYSFEPPLDQPNYDEYMADVEVRAAHNVLEACAQTETIDKVVFTSSATAVVWREDRKTIEPEIDEIHWSDVNFCRKFKLWHGMSKTLSEKTAWALAMDRGVNMVSINAGLLMTHDLTIKHPYLRGAAEMYEDGVFVTVDLGFLVDTHICVYEDVSSFGRYLCFNHIINTQDDAVQLAQKLAPTASSSLPQSDDYGKIFIEQKISNKKVNKLMVDFEA* 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1487 298 Pfam 3-beta hydroxysteroid dehydrogenase/isomerase family 14 134 IPR002225 GO:0003854|GO:0006694|GO:0016616
Tpr2g1487 298 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 8 297 - -
Tpr2g1487 298 CDD FR_SDR_e 12 294 - -
Tpr2g1487 298 PANTHER - 8 297 - -
Tpr2g1487 298 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 5 263 IPR036291 -
Tpr2g1487 298 Gene3D - 4 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1487 Tpr-Chr2 17524524 17527858 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g1487 12 296 Monolignol Biosynthesis Gene Families AT5G58490 31.023 2.28e-39 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1487 - - gmx:100790333 541.576
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g1487 2 17524524 17527858 Tpr2g1487 2 17524524 17527858 ECH