Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1481 ATGCATGCACTCTTATGTATCAAACTCAAACAAAACCTATATATTTTAATCCTCTTTCTCCTAAATCAAATGAAGTCTTTTTCTTTCTTGTCACCTATACTTTTATACCTTCATCTGTTTCTTCTGTTTACCTTAAATTTAATGTGGTTTAGTCCAAACAACATTATGGCTGCAATATTAGGAAACCAATTAGATCATTTGGCATTGCTCAAATTCAAAGAATCAATATTAAATGATCCACATAAAACTCTTGAATCTTGGAATACTTCCATCCACTTATGCAAGTGGCATGGAGTCACATGCAGCCCCATGCATGAAAGAGTTACAGAGTTGAACCTAGAAGGATATCAGTTACATGGAACTTTATCTCCCCATGTTGGCAATCTCACTTTTCTGATAAATCTCAATCTTAGAAACAATAGTTTCTTTAAAGAAATCCCACCAGAACTTGGTAAGTTGCTACAACTGCAACAACTTCGTCTCGACAAAAATTTGTTTGCAGGTAAAATTCCAACAAACTTGACATATTGCTCTAATCTCAAAGACTTGAATTTGGGATATAACATTCTAGTTGGCAAAATACCAATTGAAATTGGCTCTTTGAAAAAGCTTGAATCACTAGCCATTGATAGAAACAATTTAACCGGAGAAATACCTTCTGTCATAGGAAATCTTTCATGCTTAACAAGTTTTTTGTTTGCTTTTAACAAATTAAAAGGAGATATCCCTCAAGAAATATGTCACCTCAAAAACTTCACAACTTTAAATGTCGGTAAAAACAATTTGTCCGGTATAATTCCTTCTTGTCTCTACAATATCTCATCAATAATTAAGCTCTCCATAGCATTGAATAACTTTCATGGCTCTCTACCTCCCAACATGTTCCACACCCTCCCCAATCTCCAAACTTTTGCATTTGGAGGAAATCAATTTTCGGGCTCAATCCCCACTTCCTTAATAAATGCATCTTCTGCCTTGACATATTTTGATATCAGTCAAAACTATTTTGTCGGACAAGTTCCAATTCTAAGAAGGCTAAAAGATTTAAAATTTCTGAATTTGGAAGAGAACAATTTAGGTAACAATTCATCCAAAGATTTAGATTTTTTAAAGTATTGGACAAATTGTAGTAAACTAGAAGCGCTTTCGATAGTTGGTAATAATTTTGGTGGTAATTTGCCAAATTCTATAGGCAATATTTCTGTTGAACTTAAAGAACTATATCTAGGGGATAATCAGATATCAGGAAAAATTCCTACAGAAATAGGACATCTAGTTGGCTTAATTATCTTGACCATGGATTTTAACAACTTTGAAGGAATTATTCCAACTACTTTTGAGAAGTTCCAAAAGATGCAAGTGTTAGATTTGGAAGTAAACAAGTTGTCAGGATATATACCACCCTTTATAGGAAATCTCAATCAATTATTTGAATTGGATTTACATCTTAATATGTTTCAGGGAAATATTCCTCCAAGCATAGGAAACTCTCAAAACTTACAATATCTTGATCTTTCTCAGAATATGCTTAGTGGAAACATACCCTTAGAGATTTTTAATATTTTTTCTTTATCAAACATATTGAACTTGTCACACAACTCTTTAAGTGGTAGCTTACCAAGAGAAGTGAGTATGCTAAAAAATATTGATATGCTAGATGTCTCTGAGAATAATCTATCTGGTGATATTCCTGGAGCAATTGGTGAATGTATAAGCTTAGAATACCTTTATTTGCAAGGTAACTCCTTTAATGGAACAATACCTTCCTCTTTGGCTTCTCTCAAAGGTCTTCAATATTTAGACATTTCAAGAAATCAATTGTCTGGATCAATTCCTGATGTTATGCAAAATATCTCTTTTTTAAAATATTTGAATGTTTCTTTTAACATGCTGGAAGGCGAGGTACCGACACACGGTGTCTTTGGAAATGTAACTCAAGTAGATGTTTTTGAAAACAATAAGCTTTGTGGAGGTATTTCACAACTGCATCTACCACCATGCCCTATCAAGGGTAGGAAACACACTAAACACCATAAATTCAGGTTGATAGCAGTGATAGTTAGTGTTATTTCTTTTCTTCTCATACTTTCATTTATTATAATTATCTACTGGATGAGGAAAAGAAATAAAAAACGATCTTTTGATTCACCAACAATTGATCAGCTGGCTACAGTTTCATACCAAGACTTGCATCGAGGAACCGATGGGTTCTCGACTAGAAACTTGATCGGATCAGGAAGTTTTGGTTCAGTGTACAGAGGAAATCTTTTGTTAGAAGATAATGTTGTTGCTATAAAGGTCATGGACCTCCAAAAGAAGGGAGCTCACAAAAGTTTCGTTGTTGAATGTAATGCACTCAAGAATATTAGACACCGACATTTAGTTAAGATTTTAACATGTTGTTCTAGTATAGATTACAAAGGTCAGGAATTTAAAGCTCTAGTTTTTGAGTACATGAAAAATGGAAGCTTAGAACAATGGTTGCATCCCAATATTTTAAATTCAGAACATCCAACAACATTGAACCTTGGTCAGAGATTAAACATCATTATCGATGTTGCTTCTGCGTTACATTATCTTCACCAAGAATGTGAGCAATTGGTCCTTCATTGTGATCTAAAGCCAAGTAATGTCCTTCTTGATGATGACATGGTTGCCCACGTGAGTGATTTTGGTATAGCAAGACTCATCTCGGCCATTGGCGGTACCTCACATAAGAATACCAGTACAATTGGAATAAAAGGAACCGTTGGCTATGCTCCTCCAGAGTATGGAATGGGTTCTGAAGTGTCAAAATGTGGTGATATGTATAGCTTTGGAATCCTTGTGTTGGAAATGCTTACTGGTAGAAGACCCACTGATGAATTTTTTGAAGATGGTCAAAATCTACATAACTTTGTTGTAAATTCATTTCCTGATGATCTTATAAAGATTTTGGACCAATGTCTTGTACCAAGAGATGCAGCAGTAGCAATACAAGATGGAGACAGTGAGAATCTTATCCTAAGTGTGACAGAGTGCTTAGTTTCACTTTTTAGGATTGGACTTATTTGCTCAATGGAATCCCTAAGGGAAAGAATGAATATTGTGGATGTCACTAGAGAGCTTAGTATAATCAGGAAGACCTTTCTTGCCGGTGTCCGCACTCATAATTAG 3156 0.3466 MHALLCIKLKQNLYILILFLLNQMKSFSFLSPILLYLHLFLLFTLNLMWFSPNNIMAAILGNQLDHLALLKFKESILNDPHKTLESWNTSIHLCKWHGVTCSPMHERVTELNLEGYQLHGTLSPHVGNLTFLINLNLRNNSFFKEIPPELGKLLQLQQLRLDKNLFAGKIPTNLTYCSNLKDLNLGYNILVGKIPIEIGSLKKLESLAIDRNNLTGEIPSVIGNLSCLTSFLFAFNKLKGDIPQEICHLKNFTTLNVGKNNLSGIIPSCLYNISSIIKLSIALNNFHGSLPPNMFHTLPNLQTFAFGGNQFSGSIPTSLINASSALTYFDISQNYFVGQVPILRRLKDLKFLNLEENNLGNNSSKDLDFLKYWTNCSKLEALSIVGNNFGGNLPNSIGNISVELKELYLGDNQISGKIPTEIGHLVGLIILTMDFNNFEGIIPTTFEKFQKMQVLDLEVNKLSGYIPPFIGNLNQLFELDLHLNMFQGNIPPSIGNSQNLQYLDLSQNMLSGNIPLEIFNIFSLSNILNLSHNSLSGSLPREVSMLKNIDMLDVSENNLSGDIPGAIGECISLEYLYLQGNSFNGTIPSSLASLKGLQYLDISRNQLSGSIPDVMQNISFLKYLNVSFNMLEGEVPTHGVFGNVTQVDVFENNKLCGGISQLHLPPCPIKGRKHTKHHKFRLIAVIVSVISFLLILSFIIIIYWMRKRNKKRSFDSPTIDQLATVSYQDLHRGTDGFSTRNLIGSGSFGSVYRGNLLLEDNVVAIKVMDLQKKGAHKSFVVECNALKNIRHRHLVKILTCCSSIDYKGQEFKALVFEYMKNGSLEQWLHPNILNSEHPTTLNLGQRLNIIIDVASALHYLHQECEQLVLHCDLKPSNVLLDDDMVAHVSDFGIARLISAIGGTSHKNTSTIGIKGTVGYAPPEYGMGSEVSKCGDMYSFGILVLEMLTGRRPTDEFFEDGQNLHNFVVNSFPDDLIKILDQCLVPRDAAVAIQDGDSENLILSVTECLVSLFRIGLICSMESLRERMNIVDVTRELSIIRKTFLAGVRTHN* 1052
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1481 1051 ProSitePatterns Serine/Threonine protein kinases active-site signature. 868 880 IPR008271 GO:0004672|GO:0006468
Tpr2g1481 1051 SUPERFAMILY L domain-like 373 657 - -
Tpr2g1481 1051 Pfam Leucine rich repeat 572 631 IPR001611 GO:0005515
Tpr2g1481 1051 SUPERFAMILY Protein kinase-like (PK-like) 712 985 IPR011009 -
Tpr2g1481 1051 Gene3D Ribonuclease Inhibitor 295 668 IPR032675 -
Tpr2g1481 1051 Gene3D Ribonuclease Inhibitor 63 221 IPR032675 -
Tpr2g1481 1051 PANTHER LRR RECEPTOR-LIKE KINASE 50 1046 - -
Tpr2g1481 1051 ProSitePatterns Protein kinases ATP-binding region signature. 743 766 IPR017441 GO:0005524
Tpr2g1481 1051 SUPERFAMILY L domain-like 65 359 - -
Tpr2g1481 1051 Gene3D Ribonuclease Inhibitor 226 294 IPR032675 -
Tpr2g1481 1051 ProSiteProfiles Protein kinase domain profile. 737 1002 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g1481 1051 Pfam Protein kinase domain 739 956 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g1481 1051 PANTHER OS04G0122200 PROTEIN 50 1046 - -
Tpr2g1481 1051 Pfam Leucine rich repeat N-terminal domain 65 102 IPR013210 -
Tpr2g1481 1051 Gene3D Phosphorylase Kinase; domain 1 718 818 - -
Tpr2g1481 1051 Gene3D Transferase(Phosphotransferase) domain 1 819 1045 - -
Tpr2g1481 1051 SMART serkin_6 737 1000 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1481 Tpr-Chr2 17443572 17447909 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g1481 62 1049 Receptor kinase-like Gene Family AT3G47570 45.045 0.0 827
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Tpr2g1481 Pkinase 2.2e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1481 - - gmx:100801459 1279.62