Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1460 ATGGAGCTATTTCCAGCACAACCAGATTTATCTTTGCAAATTAGTCCTCCAAACACAAAACCAACAACAACAACAAATTGGAAAAGAACAACAACAGAAGAAGAAATGGATTTGGGGTTTTGGAAAAGAGCTTTAGATTCTAGAAACTCTTTATCATCATCAAGAAATGATAACTCTTTTGACCTTTCTCTTTCAAATCCAACAAGGTCTTTAGATTCACACAACAACAACAACACTTCTTCAAATAATCTCATTCATCATAATCACTTTCAAAATAGTGTTAGTAATAATCATAATGCAAACAACCCTTTTCAATCTTTTCAACAAAATCATTACTTTCAACACCCCCAACCACTCTTTCAACACCACCAGCTACAAAATCAACAACATCAAAGCTTAAGTCAAGAACTTGGTTTTCTTAGACCTATTAGAGGAATTCCTGTTTATCAAAACCCTCCTCCTTTGTCATTTCCTCAACTTCATAATCATAATCATAATCATAATCTTAATCATCATCTTAATCATGTTTTAGATGGTTCTACTACTACTAATACTACTACACCTTCTTCTATTTCTAACACAAACACAAGTTCAAGCCCTTTTCAATCTCAAGCTTTGATGAGGTCAAGATTCTTGTCAAGATTTCCAGCAAAAAGAAGCATGAGAGCTCCAAGGATGCGTTGGACAACGACACTTCATGCTCGATTTGTTCATGCTGTTGAGCTCTTAGGTGGCCATGAAAGGGCTACTCCAAAATCAGTTCTTGAGCTAATGGATGTTAAGGATCTTACATTAGCACATGTTAAGTCTCATTTACAGATGTATCGAACGGTGAAAACTACAGATAGAGTTGGAGCTACATCAGGGCAATCAGATGTATATGATAATGGATCATCTGGAGATAATTCTGATGACATAATGTTTGACATCAACTCTTCAAGAAGATCATCTGATTTATCCATTAAACAGCAAGGAAGATCAAGTGTTAATCAAGATAAGGAATGTTATGGTCTATGGAGCAACTCTTCTAGGGAAGCTTGGTTACATGGTAAACCAAAGATTGATTCTATTGGAAACATGCAATCTCTTGAGAAGGAAATGGATCCAAAGTGTCTAAGCTATGAGAGAATATCAGATGGAAGTTCATCCACAAACTTATCTGGATCAAGCCCCAAGAAACCTAATTTGGATTTGGAATTCACATTAGGACAACCTTCTCTTTGA 1224 0.3562 MELFPAQPDLSLQISPPNTKPTTTTNWKRTTTEEEMDLGFWKRALDSRNSLSSSRNDNSFDLSLSNPTRSLDSHNNNNTSSNNLIHHNHFQNSVSNNHNANNPFQSFQQNHYFQHPQPLFQHHQLQNQQHQSLSQELGFLRPIRGIPVYQNPPPLSFPQLHNHNHNHNLNHHLNHVLDGSTTTNTTTPSSISNTNTSSSPFQSQALMRSRFLSRFPAKRSMRAPRMRWTTTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDRVGATSGQSDVYDNGSSGDNSDDIMFDINSSRRSSDLSIKQQGRSSVNQDKECYGLWSNSSREAWLHGKPKIDSIGNMQSLEKEMDPKCLSYERISDGSSSTNLSGSSPKKPNLDLEFTLGQPSL* 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1460 407 MobiDBLite consensus disorder prediction 11 29 - -
Tpr2g1460 407 MobiDBLite consensus disorder prediction 370 407 - -
Tpr2g1460 407 MobiDBLite consensus disorder prediction 1 31 - -
Tpr2g1460 407 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 224 277 IPR006447 GO:0003677
Tpr2g1460 407 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 1 406 IPR044847 GO:0000976|GO:0006355|GO:0010158
Tpr2g1460 407 MobiDBLite consensus disorder prediction 182 202 - -
Tpr2g1460 407 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 1 406 - -
Tpr2g1460 407 MobiDBLite consensus disorder prediction 376 394 - -
Tpr2g1460 407 Pfam Myb-like DNA-binding domain 225 276 IPR001005 -
Tpr2g1460 407 Gene3D - 223 280 - -
Tpr2g1460 407 SUPERFAMILY Homeodomain-like 221 277 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1460 Tpr-Chr2 17217857 17224336 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g1460 1 407 G2-like Transcription Factor Family AT4G17695 38.208 2.55e-60 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Tpr2g1460 Myb_DNA-binding 2e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1460 - - aprc:113868756 493.426
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g1460 2 17217857 17224336 Tpr2g1460 2 17217857 17224336 ECH
Tpr2g1460 2 17217857 17224336 Tpr4g4722 4 55701004 55708321 PCT