Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1456 ATGGTGGAAGGAGGAAGAGTACGTTTGTCCGAGGAAGCTAGAAATGGGTTAGAAGTGTTGAAGCGTAAAAGGCTTCAGCGCGCACAGGCGAGTGTTGCTAACATGACAAATAGAAGCGGAGGAGATGCTTTGAGAGCTTCAGCTCCATGTGGTCCAAGATTGCATGGTAATCCGGATGTCTTTTTCAAGCGGAAGGTGGCTAAGTTTGATACAAGTGATTTGGAATGGACTGATAAAATTCCAGAGTGTCCTGTGTATTCTCCAACAAAGGAAGAATTTGAAGATCCTTTGGTTTATTTGCAAAAGATAGCTCCAGAAGCTTCTAAATATGGTATATGCAAGATTATTTCGCCTTTGAGTGCTTCTGTACCTGCTGGGGTTGTTTTAATGAAGGAGAAAGCAGGATTCAAGTTTACAACCAGAGTGCAGCCTCTTCGCCTTGCTGAATGGGATACTGAAGACAAAGTCACATTTTTTATGAGTGGAAGAAATTATACATTCCGTGATTATGAGAAAATGGCGAACAAGGTATTTGCACGAAGATATTGCAGTGTTGGATGTCTTCCTGCCACTTACTTGGAAAAGGAGTTTTGGCATGAAATTGGTTGCGGGAAAATGGATACCGTTGAATATGCATGTGATGTTGATGGCAGTGCCTTTTCATCTTCTCCTACCGATCAGCTTGGGAACAGCAAATGGAATTTGAAGAAGCTTTCCCGGTTGCCGAAATCAACACTGCGTCTCTTGGAAACTTCAATTCCAGGAGTAACAGAACCCATGCTATACATTGGAATGCTGTTTAGCATGTTTGCATGGCACGTGGAGGATCATTATTTGTACAGCATTAATTATCAGCACTGTGGTGCGTCAAAAACATGGTATGGTATCCCTGGTCATGCAGCTTTGGAATTTGAAAGGGTGGTGAGGGAACATGTATATTCTACCGATATTTTGTCAAGTGATGGGGAAGATGGAGCCTTCGATGTTCTCTTGGGGAAAACAACTTTATTTCCACCTAATATTTTGTTGGAGCATAAAGTTCCTGTCTATAAGGCTGTCCAAAAGCCAGGGGAGTTTGTAATAACCTTCCCTAGAGCGTATCATGCAGGCTTCAGTCATGGTTTCAACTGTGGAGAAGCAGTGAATTTTGCACTTGGTGATTGGTTTCCTCTTGGGGCAATTGCGAGCAGGCGATATGCACTTCTTAACAGGGTTCCTTTACTGCCCCATGAAGAACTTCTTTGCAAAGAAGCGATGCTCATTCATACATCCTTGGAACTTGAAGATTCAGACTTTCCCTCTTCAGACTTGCTTTCTCATAATAGAACAAAGATATCTTTCATTAATTTGTTGCGTTTCCAACATTGTGCCAGTTGGTTACTACTGAAATCAAGGGCATGTATAAGTGTTTCTTCTCATTCACATGGCACAATTCTCTGTAGCCTGTGCAAACGTGACTGTTATATAGCTTATGTCGATTGCAGCTGTCACATGCATCCTGTATGCCTACGCCATGATGTTAAATCTCTTGACTTCACCTGTGGGAGAAAATACACTCTTTATTTGAGAGAGGATATTGCGGATATGGAAGCTGCAGCCAAGATGTTTGAGCAAGAAGATAGGATATTGGATGAGATAAGAAAGCAATCCAAAAGTGACCAAGATATGTACTCATATCCTTTGTCAGATATGTTTCAGAGAGCTGAAGCAAATGGATACGAACGATATTGTGAGCTTAAACTTGATTCTACGATTGAATTTTATACAACTCCAGAACAGTCAACAAATAACCAAGAGTGTGGCACACAAAATCAACTTGTTTTGGGACATTGCTCAGAAGTTCATACACCGGAAGCGTCTGAGATTTCCTTTTCTGCTGCATCCACTCTTTGTTCTCTTTCAGAACCTCTTGATTGTTCCTCTGCTCCCAAAAATGCTGAGGAGCAGGCTAACTTGAAAATGGGCATTATTGATTTTGAAGAACTTGGCGAAACAGTATCCAACAGTGCATGCAAATCTTCGCTATCCCCTGCTCTGTATCATGAAAGCTCGGCTGAACTGCATGATCTCCAGAAACCGGACATGAAACCCATAGTGGATAACGACAGTGATGATTCTGATTCAGGGATATTTAGGGTAAAGCGACCTTCCTCTCTGAAAGCAGAGAAAAGAAATGCAAAGGTTGCTGCTTTGAAGCATTCTGAGCAGCAGGGACTTAAGCGATTGAAAAAAGTCCCCCCTGAAGGAAAAAGCAGGCAACAAATGAATTTCAGAACCAGTGAATTAAGTTACAAACAAAACCCTGTTAGTCATAAAGTTGATATCGAAATTTCCTCGAAGGACAGATTTGCAAGGGGAAATGGTGCTCCCATTTCTGTAAGATATAAAAAGTCAAGCAATGAAGATGTAAGCATCCATATGCAACAAGATCACCACCGGAGAGAGAGGTTTCAGCAAACTTATAGGGAAGCACCTTCCATTGAGACTGGGCCCAAGCGACTTAAAGTCCGAGGCCCTTCATTCATAGGCTTAGAGAGCAGGTTGAATTGA 2550 0.4192 MVEGGRVRLSEEARNGLEVLKRKRLQRAQASVANMTNRSGGDALRASAPCGPRLHGNPDVFFKRKVAKFDTSDLEWTDKIPECPVYSPTKEEFEDPLVYLQKIAPEASKYGICKIISPLSASVPAGVVLMKEKAGFKFTTRVQPLRLAEWDTEDKVTFFMSGRNYTFRDYEKMANKVFARRYCSVGCLPATYLEKEFWHEIGCGKMDTVEYACDVDGSAFSSSPTDQLGNSKWNLKKLSRLPKSTLRLLETSIPGVTEPMLYIGMLFSMFAWHVEDHYLYSINYQHCGASKTWYGIPGHAALEFERVVREHVYSTDILSSDGEDGAFDVLLGKTTLFPPNILLEHKVPVYKAVQKPGEFVITFPRAYHAGFSHGFNCGEAVNFALGDWFPLGAIASRRYALLNRVPLLPHEELLCKEAMLIHTSLELEDSDFPSSDLLSHNRTKISFINLLRFQHCASWLLLKSRACISVSSHSHGTILCSLCKRDCYIAYVDCSCHMHPVCLRHDVKSLDFTCGRKYTLYLREDIADMEAAAKMFEQEDRILDEIRKQSKSDQDMYSYPLSDMFQRAEANGYERYCELKLDSTIEFYTTPEQSTNNQECGTQNQLVLGHCSEVHTPEASEISFSAASTLCSLSEPLDCSSAPKNAEEQANLKMGIIDFEELGETVSNSACKSSLSPALYHESSAELHDLQKPDMKPIVDNDSDDSDSGIFRVKRPSSLKAEKRNAKVAALKHSEQQGLKRLKKVPPEGKSRQQMNFRTSELSYKQNPVSHKVDIEISSKDRFARGNGAPISVRYKKSSNEDVSIHMQQDHHRRERFQQTYREAPSIETGPKRLKVRGPSFIGLESRLN* 850
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1456 849 ProSiteProfiles JmjC domain profile. 230 400 IPR003347 -
Tpr2g1456 849 PANTHER LYSINE-SPECIFIC DEMETHYLASE 50 845 - -
Tpr2g1456 849 ProSiteProfiles JmjN domain profile. 83 124 IPR003349 -
Tpr2g1456 849 PANTHER TRANSCRIPTION FACTOR JUMONJI (JMJ) FAMILY PROTEIN / ZINC FINGER (C5HC2 TYPE) FAMILY PROTEIN 50 845 - -
Tpr2g1456 849 SUPERFAMILY Clavaminate synthase-like 161 416 - -
Tpr2g1456 849 SMART JmjN_1 82 123 IPR003349 -
Tpr2g1456 849 SMART cupin_9 227 400 IPR003347 -
Tpr2g1456 849 Pfam jmjN domain 84 116 IPR003349 -
Tpr2g1456 849 Gene3D Cupin 83 441 - -
Tpr2g1456 849 Pfam C5HC2 zinc finger 480 531 IPR004198 -
Tpr2g1456 849 MobiDBLite consensus disorder prediction 821 849 - -
Tpr2g1456 849 Pfam JmjC domain, hydroxylase 260 383 IPR003347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1456 Tpr-Chr2 17161291 17169175 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g1456 66 539 JUMONJI Transcription Factor Family AT2G34880 32.117 1.61e-62 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Tpr2g1456 JmjC 2.1e-39 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1456 - - gmx:100798611 1383.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g1456 2 17161291 17169175 Tpr2g1456 2 17161291 17169175 ECH